RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 CLEC4CQ8WTT0 213 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 DNAJB3Q8WWF6 145 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 RXFP2Q8WXD0 754 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 KAT6AQ92794 2004 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 hCG_1818297A0A087WSY0 165 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TCRBV7S3A2A0A539 114 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 MED7O43513 233 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 AVILO75366 819 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 STX2P32856 288 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 PIGHQ14442 188 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 KRT81Q14533 505 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 ZC3H12AQ5D1E8 599 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 BSPRYQ5W0U4 402 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 PIN4Q9Y237 131 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 B4GALT4O60513 344 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TFE3P19532 575 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 CDKN2BP42772 138 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 SURF1Q15526 300 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 MICALCLQ6ZW33 695 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 GPR142Q7Z601 462 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 KAT2BQ92831 832 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 VCPIP1Q96JH7 1222 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 MAGED2Q9UNF1 606 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TSPAN1O60635 241 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 RBP3P10745 1247 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 EIF4BP23588 611 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 AP3M2P53677 418 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 TRMT10CQ7L0Y3 403 aaKnown RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 XYLT1Q86Y38 959 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 C12orf50Q8NA57 414 aaPredicted RBP12.34□□□□□ -0.43
PDE6C-201ENST00000371447 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 SAMD15Q9P1V8 674 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 PNMA3Q9UL41 463 aa12.34□□□□□ -0.43
PDE6C-201ENST00000371447 A8MXQ7 604 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 AGTP01019 485 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CCDC130P13994 396 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
PDE6C-201ENST00000371447 PMF1Q6P1K2 205 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 FAM183BPQ6ZVS7 135 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 NPLOC4Q8TAT6 608 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 PGM2Q96G03 612 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CHMP2BQ9UQN3 213 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.44
PDE6C-201ENST00000371447 A0A087WUV0 522 aaPredicted RBP12.33□□□□□ -0.44
PDE6C-201ENST00000371447 MYL3P08590 195 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CTSHP09668 335 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CYP3A5P20815 502 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CCL14Q16627 93 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 CEP41Q9BYV8 373 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 FAM129AQ9BZQ8 928 aa12.33□□□□□ -0.44
PDE6C-201ENST00000371447 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
PDE6C-201ENST00000371447 PRPSAP2O60256 369 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CYP2C9P11712 490 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 DRD4P21917 467 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 GBP1P32455 592 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CNGA2Q16280 664 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 TRIM56Q9BRZ2 755 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 TPX2Q9ULW0 747 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 A6NNZ2 444 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CILPO75339 1184 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 LSM8O95777 96 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 NEFHP12036 1026 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PROZP22891 400 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 KDELR1P24390 212 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 LMO2P25791 158 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 MAN1A1P33908 653 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 MMP13P45452 471 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 RBP5P82980 135 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 TNFAIP2Q03169 654 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 TUBB8Q3ZCM7 444 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 MSS51Q4VC12 460 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms