RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 PTGER2P43116 358 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MAGEA9P43362 315 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 FOXD4Q12950 439 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MAPRE1Q15691 268 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 GRAMD1BQ3KR37 738 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MROH9Q5TGP6 573 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MTHFD1LQ6UB35 978 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TTC30AQ86WT1 665 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 SERPINI1Q99574 410 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 CATSPERBQ9H7T0 1116 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 NPHS2Q9NP85 383 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 PEX10O60683 326 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TRPA1O75762 1119 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 PYGMP11217 842 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ATICP31939 592 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 GTF2BQ00403 316 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 EFHD1Q9BUP0 239 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ASB7Q9H672 318 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TAS2R14Q9NYV8 317 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 LSM7Q9UK45 103 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 KRT33BQ14525 404 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TAF11Q15544 211 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 CELF3Q5SZQ8 465 aaKnown RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 EXD1Q8NHP7 514 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 TMEM169Q96HH4 297 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 FGFR1OP2Q9NVK5 253 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 GSTA4O15217 222 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ANO5Q75V66 913 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 RPRD1AQ96P16 312 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ROPN1BQ9BZX4 212 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 ROPN1Q9HAT0 212 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-203ENST00000368207 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 AP4E1Q9UPM8 1137 aa12.82□□□□□ -0.36
PTPRK-203ENST00000368207 POLBP06746 335 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 GJB1P08034 283 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 GFAPP14136 432 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SATB1Q01826 763 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TWF1Q12792 350 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 C11orf63Q6NUN7 778 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 RFX8Q6ZV50 586 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SGSM3Q96HU1 749 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ECT2Q9H8V3 914 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ITGA11Q9UKX5 1188 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 HES2Q9Y543 173 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ROBO3Q96MS0 1386 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 F8W8V4 182 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 CYBBP04839 570 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SKIP12755 728 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 AKR1A1P14550 325 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 MORF4L2Q15014 288 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SLFN11Q7Z7L1 901 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 EPS8L1Q8TE68 723 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TINF2Q9BSI4 451 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TSSK1BQ9BXA7 367 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 FAM96AQ9H5X1 160 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 VAV3Q9UKW4 847 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 PSEN2P49810 448 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 IRF2BP1Q8IU81 584 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 STAMBPL1Q96FJ0 436 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 DDX50Q9BQ39 737 aaKnown RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ARHGEF38Q9NXL2 777 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TGFB1I1O43294 461 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ATP5HO75947 161 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ALDH1A3P47895 512 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 TKTL1P51854 596 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ANGPTL8Q6UXH0 198 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 EDEM1Q92611 657 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 KCTD10Q9H3F6 313 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 OLA1Q9NTK5 396 aaKnown RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 CPSF2Q9P2I0 782 aaKnown RBP12.81□□□□□ -0.36
PTPRK-203ENST00000368207 ARL2BPQ9Y2Y0 163 aa12.81□□□□□ -0.36
PTPRK-203ENST00000368207 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 ZWINTO95229 277 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms