RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SRGAP2CP0DJJ0 459 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 GCLCP48506 637 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 SNX17Q15036 470 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PAF1Q8N7H5 531 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ICA1LQ8NDH6 482 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 MCUQ8NE86 351 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 DNAJC9Q8WXX5 260 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 EIF2AQ9BY44 585 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 CATSPERBQ9H7T0 1116 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 EIF2B3Q9NR50 452 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 ITGB1BP2Q9UKP3 347 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 AAR2Q9Y312 384 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 ALOX15BO15296 676 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 SMIM24O75264 130 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 RAB15P59190 212 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ACTR2P61160 394 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 LRRC34Q8IZ02 419 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PGBD4Q96DM1 585 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 CALN1Q9BXU9 219 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 FNIP2Q9P278 1114 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PHTF1Q9UMS5 762 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 LRCH1Q9Y2L9 728 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 MAD1L1Q9Y6D9 718 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 COL5A3P25940 1745 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 ESYT3A0FGR9 886 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 TRAFD1O14545 582 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 STAU1O95793 577 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 PTGER2P43116 358 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 KPNA1P52294 538 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 BCAT1P54687 386 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 GSCP56915 257 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 ART3Q13508 389 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 INPP5AQ14642 412 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 BBS12Q6ZW61 710 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 RASSF3Q86WH2 238 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 E2F7Q96AV8 911 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ZNF670Q9BS34 389 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 CXorf56Q9H5V9 222 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ZC3H7BQ9UGR2 993 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 AKT3Q9Y243 479 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 SNX3O60493 162 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 THRAP10827 490 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 TPSB2P20231 275 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 TPSAB1Q15661 275 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 CNGA2Q16280 664 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PLEKHA7Q6IQ23 1121 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 LRRC6Q86X45 466 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PTCD2Q8WV60 388 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 MYOZ2Q9NPC6 264 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 C2CD2Q9Y426 696 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ORC6Q9Y5N6 252 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 CACNA1SQ13698 1873 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 MYO5AQ9Y4I1 1855 aaKnown RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 C2CD2LO14523 706 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ADCY3O60266 1144 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 FGFR4P22455 802 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 PPP1R15BQ5SWA1 713 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ANKRD23Q86SG2 305 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 LNX1Q8TBB1 728 aaPredicted RBP7.61□□□□□ -1.19
VTA1-202ENST00000367630 LRMDAQ9H2I8 198 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 ST7Q9NRC1 585 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 MORF4L1Q9UBU8 362 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 COMMD10Q9Y6G5 202 aa7.61□□□□□ -1.19
VTA1-202ENST00000367630 RXRGP48443 463 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RAB27AP51159 221 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZYXQ15942 572 aaKnown RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 NOL9Q5SY16 702 aaKnown RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 SCYL2Q6P3W7 929 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 OXCT2Q9BYC2 517 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 NINJ2Q9NZG7 142 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RABGEF1Q9UJ41 708 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 MAPRE3Q9UPY8 281 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PGAM1P18669 254 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PCSK1P29120 753 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 TMEM126BQ8IUX1 230 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SLC22A9Q8IVM8 553 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SPICE1Q8N0Z3 855 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 CPNE1Q99829 537 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 FAM86B1E9PN63 330 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ACKR2O00590 384 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 C21orf2O43822 256 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 FAM86B2P0C5J1 330 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RALAP11233 206 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 TTKP33981 857 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PGM1P36871 562 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 GEMP55040 296 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 CSE1LP55060 971 aaKnown RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 MSLNQ13421 630 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 FAM102AQ5T9C2 384 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 RNF168Q8IYW5 571 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 STK32AQ8WU08 396 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 LRRC4BQ9NT99 713 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SMARCAL1Q9NZC9 954 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ARHGAP26Q9UNA1 814 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 TNFSF13BQ9Y275 285 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ADGRA2Q96PE1 1338 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SHANK3Q9BYB0 1731 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RPL21P46778 160 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms