RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 WFS1O76024 890 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 HNRNPCP07910 306 aaKnown RBP eCLIP12.27□□□□□ -0.455e-6■■■□□ 16.4
CDC42BPA-202ENST00000366764 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 PNPLA4P41247 253 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 NAPEPLDQ6IQ20 393 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 KYAT3Q6YP21 454 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 TNFRSF25Q93038 417 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 KCNK4Q9NYG8 393 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 ELF3P78545 371 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 PTPRN2Q92932 1015 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 PYGMP11217 842 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 FCGR1AP12314 374 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CCDC15Q0P6D6 951 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 LMBRD2Q68DH5 695 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DSTYKQ6XUX3 929 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 FBXO36Q8NEA4 188 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ACTL9Q8TC94 416 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 H0Y626 953 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 TRIM16O95361 564 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 POU5F1BQ06416 359 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLC34A1Q06495 639 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 WDR49Q8IV35 697 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CCT7Q99832 543 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF212Q9UDV6 495 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SNX3O60493 162 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 UNC5CO95185 931 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CYP1A2P05177 515 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ATICP31939 592 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ABI1Q8IZP0 508 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CLMNQ96JQ2 1002 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLC38A7Q9NVC3 462 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 MAP4P27816 1152 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ATPAF2Q8N5M1 289 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 OR6P1Q8NGX9 317 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ATG4AQ8WYN0 398 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMEM143Q96AN5 459 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 HPDLQ96IR7 371 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 EFCAB1Q9HAE3 211 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 PSMA4P25789 261 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DTNAQ9Y4J8 743 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 MTMR2Q13614 643 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DNAJC19Q96DA6 116 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SOX13Q9UN79 622 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DNALI1O14645 258 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CYTH3O43739 400 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF280CQ8ND82 737 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 CCDC153Q494R4 210 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 DUPD1Q68J44 220 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
CDC42BPA-202ENST00000366764 GOLGA8TH3BQL2 631 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 MYLK4Q86YV6 388 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM71AQ8IYT1 594 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF555Q8NEP9 628 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 IFT43Q96FT9 208 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMEM247A6NEH6 219 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 DDX5P17844 614 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 DRD4P21917 467 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 CDK7P50613 346 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM83EQ2M2I3 478 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 APPL2Q8NEU8 664 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 SNUPNO95149 360 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 KLRK1P26718 216 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 NUP107P57740 925 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 MYL6P60660 151 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 OTUD4Q01804 1114 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 RASGEF1CQ8N431 466 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 OR9Q1Q8NGQ5 310 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 TRAPPC9Q96Q05 1148 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 USP18Q9UMW8 372 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 DYTNA2CJ06 578 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 APOA1P02647 267 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 MFN1Q8IWA4 741 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 DRG1Q9Y295 367 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 KCNQ2O43526 872 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLC26A2P50443 739 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 BAATQ14032 418 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 EEPD1Q7L9B9 569 aa12.25□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM49AQ9H0Q0 323 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms