RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 CHRM3P20309 590 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 VIPR2P41587 438 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PDE6CP51160 858 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SUMO2P61956 95 aaKnown RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CYP4F2P78329 520 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HTRA4P83105 476 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 INAVAQ3KP66 663 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ARHGAP40Q5TG30 622 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 EMC10Q5UCC4 262 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KIRREL2Q6UWL6 708 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 Q6ZWC4 215 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HEATR3Q7Z4Q2 680 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PIM3Q86V86 326 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FAM90A1Q86YD7 464 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SFTPA1Q8IWL2 248 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 C16orf71Q8IYS4 520 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SIRT6Q8N6T7 355 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SMRP1Q8NCR6 262 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FAM46DQ8NEK8 389 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KAT5Q92993 513 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RSPRY1Q96DX4 576 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 THOC3Q96J01 351 aaKnown RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CCDC17Q96LX7 622 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SLC46A1Q96NT5 459 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SLC13A1Q9BZW2 595 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SPRTNQ9H040 489 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SARS2Q9NP81 518 aaKnown RBP2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HESX1Q9UBX0 185 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ABCF2Q9UG63 623 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SERTAD3Q9UJW9 196 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PAXBP1Q9Y5B6 917 aa2.32□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CCDC187A0A096LP49 1063 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ALG1L2C9J202 215 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PRR23D1E9PI22 279 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 M0R3H8 397 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 USP12O75317 370 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MT-CO1P00395 513 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FTLP02792 175 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 A1BGP04217 495 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 THP07101 528 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PRR23D2P0DMB1 279 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 T-ENOLP0DO92 83 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CYP2A6P11509 494 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 VCAM1P19320 739 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 EDNRBP24530 442 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ATP5F1P24539 256 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 IARSP41252 1262 aaKnown RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CLCN2P51788 898 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HK3P52790 923 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 NOGQ13253 232 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SEMA3AQ14563 771 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FAM187BQ17R55 369 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MGAT5BQ3V5L5 792 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 L1TD1Q5T7N2 865 aaKnown RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MEX3CQ5U5Q3 659 aaKnown RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 LHFPL2Q6ZUX7 228 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SLC15A3Q8IY34 581 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MPLKIPQ8TAP9 179 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 OSCP1Q8WVF1 389 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SOCS4Q8WXH5 440 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ATG4AQ8WYN0 398 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 GLG1Q92896 1179 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 COQ8BQ96D53 544 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RITA1Q96K30 269 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TEKT5Q96M29 485 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 DMRTA2Q96SC8 542 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CIPCQ9C0C6 399 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TTYH3Q9C0H2 523 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MRPL46Q9H2W6 279 aaKnown RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SNX15Q9NRS6 342 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 LMBRD1Q9NUN5 540 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 GABRQQ9UN88 632 aa2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SCAF8Q9UPN6 1271 aaKnown RBP2.31□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MARCH6O60337 910 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TULP3O75386 442 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PHKA1P46020 1223 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ME1P48163 572 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZNF134P52741 427 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 WNT3P56703 355 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ID2Q02363 134 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 DSC2Q02487 901 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ITKQ08881 620 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RBMS2Q15434 407 aaKnown RBP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 Q4G0T1 1027 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 C10orf25Q5T742 122 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RNF187Q5TA31 235 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RGS7BPQ6MZT1 257 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PDXDC1Q6P996 788 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 VSTM1Q6UX27 236 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 DEF8Q6ZN54 512 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 R3HDM4Q96D70 268 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CDK5RAP3Q96JB5 506 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 VCPIP1Q96JH7 1222 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CAMKK2Q96RR4 588 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SPC25Q9HBM1 224 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SERHLQ9NQF3 203 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PDGFCQ9NRA1 345 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PNPOQ9NVS9 261 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms