RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FAM13CQ8NE31 585 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 SEMA4DQ92854 862 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ZDHHC15Q96MV8 337 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 CISHQ9NSE2 258 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 PDGFRBP09619 1106 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 TAC1P20366 129 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 EME1Q96AY2 570 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 SGF29Q96ES7 293 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 PPCSQ9HAB8 311 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 GRHL1Q9NZI5 618 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ABCC6O95255 1503 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 A8MXQ7 604 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 SNUPNO95149 360 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 CCNHP51946 323 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 FASTKD3Q14CZ7 662 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 KBTBD12Q3ZCT8 623 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 TCHHL1Q5QJ38 904 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ZCCHC9Q8N567 271 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 SHC3Q92529 594 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 WASHC2DQ5SRD0 308 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 ZDHHC24Q6UX98 284 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 CDKL3Q8IVW4 592 aaPredicted RBP14.48□□□□□ -0.09
COL6A1-201ENST00000361866 CYP4X1Q8N118 509 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 CNBD2Q96M20 576 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 ATXN2Q99700 1313 aaKnown RBP14.48□□□□□ -0.09
COL6A1-201ENST00000361866 E9PBE3 544 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 FSCN2O14926 492 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 KLHL41O60662 606 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 APOEP02649 317 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 NUDT2P50583 147 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 BNIP1Q12981 228 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 SPRED3Q2MJR0 410 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 CIAPIN1Q6FI81 312 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 OTOAQ7RTW8 1153 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 PYDC1Q8WXC3 89 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 SRPK1Q96SB4 655 aaKnown RBP14.48□□□□□ -0.09
COL6A1-201ENST00000361866 CEP41Q9BYV8 373 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 PCDH9Q9HC56 1237 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 GRID1Q9ULK0 1009 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 AURKCQ9UQB9 309 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 SERPINB5P36952 375 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 DCAF12L1Q5VU92 463 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 TMC2Q8TDI7 906 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 ZCWPW1Q9H0M4 648 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 ACAD9Q9H845 621 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 C20orf96Q9NUD7 363 aaPredicted RBP14.48□□□□□ -0.09
COL6A1-201ENST00000361866 SHOC2Q9UQ13 582 aa14.48□□□□□ -0.09
COL6A1-201ENST00000361866 KCNA4P22459 653 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CDH8P55286 799 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 HYIQ5T013 277 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CATSPER4Q7RTX7 472 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 IFNEQ86WN2 208 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 EFCAB3Q8N7B9 438 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 OXNAD1Q96HP4 312 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-201ENST00000361866 XAB2Q9HCS7 855 aaKnown RBP14.47□□□□□ -0.09
COL6A1-201ENST00000361866 SIX2Q9NPC8 291 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 PIM2Q9P1W9 311 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 PDP2Q9P2J9 529 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 MYBPC2Q14324 1141 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 SLC1A5Q15758 541 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 RNF43Q68DV7 783 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CCDC138Q96M89 665 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 SIK2Q9H0K1 926 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-201ENST00000361866 A1CFQ9NQ94 594 aaKnown RBP14.47□□□□□ -0.09
COL6A1-201ENST00000361866 STARD13Q9Y3M8 1113 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 TPST1O60507 370 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.099e-7■■■■■ 41.1
COL6A1-201ENST00000361866 C16orf46Q6P387 395 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 SLFN11Q7Z7L1 901 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 TRABD2AQ86V40 505 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 RTKN2Q8IZC4 609 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CMTM5Q96DZ9 223 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CCDC68Q9H2F9 335 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
COL6A1-201ENST00000361866 CYP3A7-CYP3A51PA0A087WV96 503 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 KLHL2O95198 593 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 ICAM1P05362 532 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 CYP3A7P24462 503 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 STIP1P31948 543 aaKnown RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 NBPF20Q3BBV1 942 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 SYTL5Q8TDW5 730 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 KCNK16Q96T55 309 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 AGO4Q9HCK5 861 aaKnown RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 WDR35Q9P2L0 1181 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 MID2Q9UJV3 735 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 LTN1O94822 1766 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 MRC1P22897 1456 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 ARHGAP10A1A4S6 786 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 CYP1A2P05177 515 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 LAMB3Q13751 1172 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 PDK4Q16654 411 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 SLC45A4Q5BKX6 768 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 LRRC8EQ6NSJ5 796 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 IL31RAQ8NI17 732 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 ZDHHC18Q9NUE0 388 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms