RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 BNIP3LO60238 219 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 CHEK2O96017 543 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 SSTR1P30872 391 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 ACADSBP45954 432 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
SCAF1-201ENST00000360565 EFHC1Q5JVL4 640 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
SCAF1-201ENST00000360565 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 SPON2Q9BUD6 331 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 XAB2Q9HCS7 855 aaKnown RBP17.02■□□□□ 0.32
SCAF1-201ENST00000360565 POLBP06746 335 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
SCAF1-201ENST00000360565 TMEM176AQ96HP8 235 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 NSL1Q96IY1 281 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 MAGEB5Q9BZ81 275 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 SPATC1LQ9H0A9 340 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 SHOC2Q9UQ13 582 aa17.02■□□□□ 0.32
SCAF1-201ENST00000360565 FECHP22830 423 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.31
SCAF1-201ENST00000360565 YWHAHQ04917 246 aaPredicted RBP17.02■□□□□ 0.31
SCAF1-201ENST00000360565 USP10Q14694 798 aaKnown RBP17.02■□□□□ 0.31
SCAF1-201ENST00000360565 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 SHISA4Q96DD7 197 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 IFT43Q96FT9 208 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 CPB2Q96IY4 423 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 NCANO14594 1321 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 LMO7Q8WWI1 1683 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.31
SCAF1-201ENST00000360565 ZSCAN5DPP0CG00 497 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 SPRP35270 261 aaPredicted RBP17.02■□□□□ 0.31
SCAF1-201ENST00000360565 DUPD1Q68J44 220 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 NOTUMQ6P988 496 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 DNERQ8NFT8 737 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 CTNNAL1Q9UBT7 734 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 SLC24A2Q9UI40 661 aa17.02■□□□□ 0.31
SCAF1-201ENST00000360565 C6orf222P0C671 652 aaPredicted RBP17.01■□□□□ 0.31
SCAF1-201ENST00000360565 ESRRGP62508 458 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 SLC35G1Q2M3R5 365 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCAF1-201ENST00000360565 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 AFG1LQ8WV93 481 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 SP110Q9HB58 689 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 IL1RL1Q01638 556 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 KIAA1257Q9ULG3 409 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 FAF1Q9UNN5 650 aaPredicted RBP17.01■□□□□ 0.31
SCAF1-201ENST00000360565 LCA5LO95447 670 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 DNAL1Q4LDG9 190 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 ATP13A4Q4VNC1 1196 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 ZPBP2Q6X784 338 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 FAM131BQ86XD5 332 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 FRMD8P1Q9BZ68 369 aaPredicted RBP17.01■□□□□ 0.31
SCAF1-201ENST00000360565 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 PCYOX1Q9UHG3 505 aa17.01■□□□□ 0.31
SCAF1-201ENST00000360565 GNGT2O14610 69 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 TGFB3P10600 412 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 DAB2IPQ5VWQ8 1189 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 CENPKQ9BS16 269 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 SHCBP1LQ9BZQ2 653 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 CXorf56Q9H5V9 222 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17■□□□□ 0.31
SCAF1-201ENST00000360565 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 O00370 1275 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 TASP1Q9H6P5 420 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 C20orf96Q9NUD7 363 aaPredicted RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 M0QYT0 321 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 FLT3P36888 993 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 TAF6P49848 677 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 NSUN2Q08J23 767 aaKnown RBP eCLIP17■□□□□ 0.31
SCAF1-201ENST00000360565 PRPF39Q86UA1 669 aaKnown RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 TFB1MQ8WVM0 346 aaKnown RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 C10orf88Q9H8K7 445 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 POLIQ9UNA4 740 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 NCAM1P13591 858 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 INSRRP14616 1297 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 PTGER2P43116 358 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 UGCGQ16739 394 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 DGKDQ16760 1214 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 THEGQ9P2T0 379 aa17■□□□□ 0.31
SCAF1-201ENST00000360565 UBQLN1Q9UMX0 589 aaKnown RBP17■□□□□ 0.31
SCAF1-201ENST00000360565 NVLO15381 856 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 APOEP02649 317 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 CYP1A2P05177 515 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 EPHB2P29323 1055 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ELK3P41970 407 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 DRG2P55039 364 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 DGKZQ13574 1117 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 PTK6Q13882 451 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 PDK2Q15119 407 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ZNF484Q5JVG2 852 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ANO5Q75V66 913 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 MTDHQ86UE4 582 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 DNAJC9Q8WXX5 260 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 UBA6A0AVT1 1052 aaPredicted RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 CSPG5O95196 566 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms