RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 LPXNO60711 386 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 MT-ND3P03897 115 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 ATP5BP06576 529 aaKnown RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 RPL22P35268 128 aaKnown RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 RFC5P40937 340 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 ETV4P43268 484 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 NEK3P51956 506 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 OCRLQ01968 901 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 SP4Q02446 784 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 KLC1Q07866 573 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 FNBP1LQ5T0N5 605 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 TXNRD3NBQ6F5E7 133 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 ANO7Q6IWH7 933 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 SLC7A3Q8WY07 619 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 MIPEPQ99797 713 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 CADM1Q9BY67 442 aaKnown RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 KANSL3Q9P2N6 904 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 MAFBQ9Y5Q3 323 aaPredicted RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 IKBKGQ9Y6K9 419 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 MYH9P35579 1960 aaKnown RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 A8MXQ7 604 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 APOC4-APOC2K7ER74 178 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 RGS20O76081 388 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 APOC2P02655 101 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 CDK18Q07002 472 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 PRKD1Q15139 912 aaPredicted RBP18.54■□□□□ 0.56
RTN4-204ENST00000357732 GPAT2Q6NUI2 795 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 TRIM42Q8IWZ5 723 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 HAUS1Q96CS2 278 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 ATG4CQ96DT6 458 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 CISHQ9NSE2 258 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 FBXO40Q9UH90 709 aa18.54■□□□□ 0.56
RTN4-204ENST00000357732 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 GSC2O15499 205 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 CST8O60676 142 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 ENTPD5O75356 428 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 OATP04181 439 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 PSMA2P25787 234 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 STIP1P31948 543 aaKnown RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 MSS51Q4VC12 460 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 IRGCQ6NXR0 463 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 CCDC62Q6P9F0 684 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 SLC44A1Q8WWI5 657 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 TARS2Q9BW92 718 aaKnown RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 NIFKQ9BYG3 293 aaKnown RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 PNPLA8Q9NP80 782 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 HEY2Q9UBP5 337 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 LRCH1Q9Y2L9 728 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 GOLGA8SH3BPF8 625 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 GOLGA8MH3BSY2 632 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 NVLO15381 856 aaKnown RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 GYG2O15488 501 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 MED7O43513 233 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 ATG7O95352 703 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 NPTXRO95502 500 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 KDELR1P24390 212 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 SSTR3P32745 418 aaPredicted RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 CXCL9Q07325 125 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 MUM1Q2TAK8 710 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 ANKRD22Q5VYY1 191 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 RFWD2Q8NHY2 731 aa18.53■□□□□ 0.56
RTN4-204ENST00000357732 XPO7Q9UIA9 1087 aaKnown RBP18.53■□□□□ 0.56
RTN4-204ENST00000357732 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 KRT3P12035 628 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 EFTUD2Q15029 972 aaKnown RBP eCLIP18.52■□□□□ 0.564e-14■■■■■ 28.8
RTN4-204ENST00000357732 WDTC1Q8N5D0 677 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 MRRFQ96E11 262 aaKnown RBP18.52■□□□□ 0.56
RTN4-204ENST00000357732 ZNF333Q96JL9 665 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 ZBTB45Q96K62 511 aaPredicted RBP18.52■□□□□ 0.56
RTN4-204ENST00000357732 WDR83Q9BRX9 315 aaKnown RBP18.52■□□□□ 0.56
RTN4-204ENST00000357732 SYNCQ9H7C4 482 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 DCTN4Q9UJW0 460 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 PPME1Q9Y570 386 aa18.52■□□□□ 0.56
RTN4-204ENST00000357732 A0A0G2JND7 137 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 MCF2LO15068 1137 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 LRCH4O75427 683 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 EGFRP00533 1210 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 DLDP09622 509 aaKnown RBP18.52■□□□□ 0.55
RTN4-204ENST00000357732 SKIP12755 728 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 BRD2P25440 801 aaKnown RBP18.52■□□□□ 0.55
RTN4-204ENST00000357732 EFNA5P52803 228 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 GDF10P55107 478 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 PTK7Q13308 1070 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 CCDC6Q16204 474 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 ZBTB41Q5SVQ8 909 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 TRIM68Q6AZZ1 485 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 TTC8Q8TAM2 541 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 MCUR1Q96AQ8 359 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 FAM167BQ9BTA0 163 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 VCXQ9H320 206 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 ZNF302Q9NR11 478 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 SPATS2LQ9NUQ6 558 aaKnown RBP18.52■□□□□ 0.55
RTN4-204ENST00000357732 CNTN3Q9P232 1028 aa18.52■□□□□ 0.55
RTN4-204ENST00000357732 SLC17A7Q9P2U7 560 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms