RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DNAI2Q9GZS0 605 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 AFF4Q9UHB7 1163 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 CYTH4Q9UIA0 394 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 PCDHGC3Q9UN70 934 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 EYSQ5T1H1 3165 aa26.89■■□□□ 1.9
SSBP3-202ENST00000357475 PATJQ8NI35 1801 aa26.89■■□□□ 1.9
SSBP3-202ENST00000357475 DDX3XO00571 662 aaKnown RBP eCLIP26.89■■□□□ 1.895e-8■■□□□ 11.6
SSBP3-202ENST00000357475 MED7O43513 233 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 ATF2P15336 505 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 CFAP221Q4G0U5 840 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 HABP4Q5JVS0 413 aaKnown RBP26.89■■□□□ 1.89
SSBP3-202ENST00000357475 C4orf50Q6ZRC1 276 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 Q7L0L9 218 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 DNAAF5Q86Y56 855 aa26.89■■□□□ 1.89
SSBP3-202ENST00000357475 SECISBP2LQ93073 1101 aaKnown RBP26.89■■□□□ 1.89
SSBP3-202ENST00000357475 SEPT11Q9NVA2 429 aaKnown RBP26.89■■□□□ 1.89
SSBP3-202ENST00000357475 PRRC2BQ5JSZ5 2229 aaKnown RBP26.89■■□□□ 1.89
SSBP3-202ENST00000357475 SOWAHDA6NJG2 315 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 AP1G2O75843 785 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 MAP3K7CLP57077 242 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 PDE4CQ08493 712 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 MTF1Q14872 753 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 PTPROQ16827 1216 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 SDHAF4Q5VUM1 108 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 TPGS2Q68CL5 300 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 CLEC20AQ6ZU45 233 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 ZNF677Q86XU0 584 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 ANKRD52Q8NB46 1076 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 SMARCD1Q96GM5 515 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 DUSP16Q9BY84 665 aa26.88■■□□□ 1.89
SSBP3-202ENST00000357475 NHEJ1Q9H9Q4 299 aaPredicted RBP26.88■■□□□ 1.89
SSBP3-202ENST00000357475 FAM200BP0CF97 657 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 EPCAMP16422 314 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 NRIP1P48552 1158 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 CDK17Q00537 523 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 ASTE1Q2TB18 679 aaPredicted RBP26.87■■□□□ 1.89
SSBP3-202ENST00000357475 LRRC8AQ8IWT6 810 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 C1orf131Q8NDD1 294 aaKnown RBP26.87■■□□□ 1.89
SSBP3-202ENST00000357475 SPPL2BQ8TCT7 592 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 SLC22A17Q8WUG5 538 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 SEPT5Q99719 369 aaPredicted RBP26.87■■□□□ 1.89
SSBP3-202ENST00000357475 BAG1Q99933 345 aaPredicted RBP26.87■■□□□ 1.89
SSBP3-202ENST00000357475 CYP4F11Q9HBI6 524 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 TAS2R14Q9NYV8 317 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 ADAMTS1Q9UHI8 967 aa26.87■■□□□ 1.89
SSBP3-202ENST00000357475 BZW2Q9Y6E2 419 aaKnown RBP26.87■■□□□ 1.89
SSBP3-202ENST00000357475 A0A087X0T9 212 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 PTMAP06454 111 aaKnown RBP26.86■■□□□ 1.89
SSBP3-202ENST00000357475 FAM228BP0C875 321 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 HAPLN1P10915 354 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-202ENST00000357475 NPR3P17342 541 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 TNFAIP3P21580 790 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 GPD2P43304 727 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 MAPK8IP2Q13387 824 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-202ENST00000357475 STILQ15468 1287 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 DDR2Q16832 855 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 MGAT5BQ3V5L5 792 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 SLC30A5Q8TAD4 765 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 GPR152Q8TDT2 470 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 FUBP3Q96I24 572 aaKnown RBP eCLIP26.86■■□□□ 1.89
SSBP3-202ENST00000357475 PDCL3Q9H2J4 239 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 TLE6Q9H808 572 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 ABCB6Q9NP58 842 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 HESX1Q9UBX0 185 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 FBXW11Q9UKB1 542 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 GREB1Q4ZG55 1949 aa26.86■■□□□ 1.89
SSBP3-202ENST00000357475 F8VP50 259 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 GLUD1P00367 558 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 CYP1A1P04798 512 aaPredicted RBP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 NOMO3P69849 1222 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 SMARCB1Q12824 385 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 DUSP6Q16828 381 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 TCEAL5Q5H9L2 206 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 NAA35Q5VZE5 725 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 LLGL2Q6P1M3 1020 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 SCN4BQ8IWT1 228 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 VN1R2Q8NFZ6 395 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 C2orf15Q8WU43 125 aaKnown RBP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 CPA5Q8WXQ8 436 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 ZNF830Q96NB3 372 aaPredicted RBP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 CSNK1G1Q9HCP0 422 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 SPTLC3Q9NUV7 552 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 MTCH2Q9Y6C9 303 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 GABBR2O75899 941 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 ATF6P18850 670 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 BCAT1P54687 386 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 GFPT1Q06210 699 aaPredicted RBP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 BST2Q10589 180 aaKnown RBP26.85■■□□□ 1.89
SSBP3-202ENST00000357475 CYP26C1Q6V0L0 522 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 RAD9BQ6WBX8 426 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 GPRIN1Q7Z2K8 1008 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 FEZF2Q8TBJ5 459 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 SLC35F5Q8WV83 523 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 LHX5Q9H2C1 402 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 KCNF1Q9H3M0 494 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 TJP2Q9UDY2 1190 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 HCFC2Q9Y5Z7 792 aa26.85■■□□□ 1.89
SSBP3-202ENST00000357475 ATP8B3O60423 1300 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 SSU72P8A0A1W2PR75 194 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms