RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 INTS2Q9H0H0 1204 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SELENONQ9NZV5 590 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PRDM4Q9UKN5 801 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 S100A9P06702 114 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 POLD1P28340 1107 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PNPLA4P41247 253 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 WASHC5Q12768 1159 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 Q4G0T1 1027 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SBK1Q52WX2 424 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 GLYCTKQ8IVS8 523 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CNOT3O75175 753 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RGS20O76081 388 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PRAMEP78395 509 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BNIP2Q12982 314 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 COBLL1Q53SF7 1204 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MTX3Q5HYI7 312 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 KCNT1Q5JUK3 1230 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 C3orf62Q6ZUJ4 267 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SFR1Q86XK3 245 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MAPKAPK5Q8IW41 473 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SRBD1Q8N5C6 995 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TMIEQ8NEW7 156 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 NSUN6Q8TEA1 469 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SKA1Q96BD8 255 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RMND5AQ9H871 391 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PLK2Q9NYY3 685 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RAD51CO43502 376 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MTTPP55157 894 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RAD51Q06609 339 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FUCA2Q9BTY2 467 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TMEM109Q9BVC6 243 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PNPLA8Q9NP80 782 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ENO1P06733 434 aaKnown RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TXNRD1Q16881 649 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 UNC5CLQ8IV45 518 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 STAMQ92783 540 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 AGBL1Q96MI9 1066 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PNKPQ96T60 521 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 METTL5Q9NRN9 209 aaKnown RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MFHAS1Q9Y4C4 1052 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TGDSO95455 350 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 CRKP46108 304 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GALNT15Q8N3T1 639 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 BHMTQ93088 406 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PCSK1P29120 753 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 NUP62P37198 522 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TUBA1BP68363 451 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 CHRNDQ07001 517 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ITGB3BPQ13352 177 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TUBA1AQ71U36 451 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MTMR12Q9C0I1 747 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 RAB26Q9ULW5 256 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GDAQ9Y2T3 454 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ABCA6Q8N139 1617 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 CAPN1P07384 714 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 CCNA2P20248 432 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 SNIP1Q8TAD8 396 aaKnown RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TMEM237Q96Q45 408 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MED10Q9BTT4 135 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PLEKHA4Q9H4M7 779 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 WDR37Q9Y2I8 494 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 AFF2P51816 1311 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 C5orf58C9J3I9 102 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PIK3R1P27986 724 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 SLC29A2Q14542 456 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 MCUQ8NE86 351 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GTSE1Q9NYZ3 720 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TESPA1A2RU30 521 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 AKAP10O43572 662 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ADCY1Q08828 1119 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TMCO4Q5TGY1 634 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PTPRN2Q92932 1015 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 COQ7Q99807 217 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 PHF20Q9BVI0 1012 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 DDHD2O94830 711 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 F9P00740 461 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 APRTP07741 180 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 SLC10A5Q5PT55 438 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ZFAND2BQ8WV99 257 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 APOPT1Q96IL0 206 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 KLHL20Q9Y2M5 609 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 NFAT5O94916 1531 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 RTN3O95197 1032 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ST3GAL1Q11201 340 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 POLG2Q9UHN1 485 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 USP27XA6NNY8 438 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 UBAP1LF5GYI3 381 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 P4HBP07237 508 aaKnown RBP6.81□□□□□ -1.32
VPS13B-202ENST00000357162 GP5P40197 560 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ARPC4P59998 168 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 STK39Q9UEW8 545 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 ZBTB21Q9ULJ3 1066 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 TGM2P21980 687 aa6.81□□□□□ -1.32
VPS13B-202ENST00000357162 FGFR4P22455 802 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms