RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ANO5Q75V66 913 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ZNF212Q9UDV6 495 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ZBED1O96006 694 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 TCHHL1Q5QJ38 904 aaPredicted RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 PPIL6Q8IXY8 311 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 LRP6O75581 1613 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SLC26A4O43511 780 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 NEK3P51956 506 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 VPS72Q15906 364 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 C10orf82Q8WW14 230 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 PPWD1Q96BP3 646 aaKnown RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 CDHR1Q96JP9 859 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 PRMT6Q96LA8 375 aaPredicted RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 HSD17B14Q9BPX1 270 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ZC3H7BQ9UGR2 993 aaKnown RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 FIS1Q9Y3D6 152 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ROBO3Q96MS0 1386 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 F8VP50 259 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 ATP6V1G1O75348 118 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 LYNP07948 512 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 SHC3Q92529 594 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 SLC7A6OSQ96CW6 309 aaPredicted RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 VPS11Q9H270 941 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 KCNH7Q9NS40 1196 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 ANPEPP15144 967 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 ELK3P41970 407 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 USP6NLQ92738 828 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 A6NHS1 94 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 AIM2O14862 343 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 UBE4BO95155 1302 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 TCN1P20061 433 aaPredicted RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 PSMC1P62191 440 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 RPL7AP62424 266 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 AP1B1Q10567 949 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 CHD4Q14839 1912 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 TRMT5Q32P41 509 aaKnown RBP13.09□□□□□ -0.31
BDNF-202ENST00000356660 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 KRT80Q6KB66 452 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 CCDC33Q8N5R6 958 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 TRAPPC9Q96Q05 1148 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 GCNAQ96QF7 691 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 NACA2Q9H009 215 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
BDNF-202ENST00000356660 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 GYS1P13807 737 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 GTF2H1P32780 548 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 KBTBD12Q3ZCT8 623 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 DCLK2Q8N568 766 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 GSTCDQ8NEC7 633 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 PPP2R3CQ969Q6 453 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 DGKIO75912 1065 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 GLRA2P23416 452 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 CCNFP41002 786 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 CDH6P55285 790 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 TMEM143Q96AN5 459 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 LGALS13Q9UHV8 139 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 CYP3A7-CYP3A51PA0A087WV96 503 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms