RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ASNSP08243 561 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 THRAP10827 490 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 QARSP47897 775 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 DDR2Q16832 855 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 UGP2Q16851 508 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 MFSD4BQ5TF39 518 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 PPIL6Q8IXY8 311 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 USP38Q8NB14 1042 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 CATSPER2Q96P56 530 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 SPATA16Q9BXB7 569 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 EPS8L2Q9H6S3 715 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 WWOXQ9NZC7 414 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 RAB21Q9UL25 225 aa11.44□□□□□ -0.58
GTF3C1-201ENST00000356183 TRIM49D1C9J1S8 452 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 POLD3Q15054 466 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CLVS1Q8IUQ0 354 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 MAP3K13O43283 966 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 H2AFYO75367 372 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 APOA4P06727 396 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PDGFRAP16234 1089 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PSMA3P25788 255 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 RAD51Q06609 339 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.43□□□□□ -0.583e-9■■■■■ 28.2
GTF3C1-201ENST00000356183 CNTN1Q12860 1018 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 NAB2Q15742 525 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 FOXR1Q6PIV2 292 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 LRRC49Q8IUZ0 686 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 IZUMO1Q8IYV9 350 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TDRD5Q8NAT2 981 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 UBA3Q8TBC4 463 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 FAM167AQ96KS9 214 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 BCL2L14Q9BZR8 327 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CYP4F12Q9HCS2 524 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ZNF446Q9NWS9 450 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PAK5Q9P286 719 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TAGLN3Q9UI15 199 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SAMD9LQ8IVG5 1584 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 VWA5AO00534 786 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PDGFRBP09619 1106 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 MYBP10242 640 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 KCNB1Q14721 858 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 RASA2Q15283 850 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ATAD3BQ5T9A4 648 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SCARA3Q6AZY7 606 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PCP4L1A6NKN8 68 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CENPXA8MT69 81 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 KLHL41O60662 606 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ACOT2P49753 483 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SUPT20HL1Q3ZLR7 823 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 FAXCQ5TGI0 409 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CACHD1Q5VU97 1274 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ATG16L2Q8NAA4 619 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 MAGED4Q96JG8 741 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ENTPD7Q9NQZ7 604 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CHKBQ9Y259 395 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 IGSF1Q8N6C5 1336 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TSPAN9O75954 239 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 YWHABP31946 246 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 GLRBP48167 497 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CCT8P50990 548 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TWF1Q12792 350 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 STX5Q13190 355 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TMBIM4Q9HC24 238 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 USP21Q9UK80 565 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 CALB2P22676 271 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 RCAN1P53805 252 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 KLHL12Q53G59 568 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TAF2Q6P1X5 1199 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 LRRN4CLQ8ND94 238 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 ATAD3AQ9NVI7 634 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 TMCC3Q9ULS5 477 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 DNAJC16Q9Y2G8 782 aa11.43□□□□□ -0.58
GTF3C1-201ENST00000356183 SNTNA6NMZ2 147 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 PHGDHO43175 533 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 NFICP08651 508 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 RFC5P40937 340 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 ITGADQ13349 1161 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 ZBTB49Q6ZSB9 765 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 TMEM26Q6ZUK4 368 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 SPATA33Q96N06 139 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 EPB41L4AQ9HCS5 686 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 BTBD7Q9P203 1132 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 ARF5P84085 180 aa11.42□□□□□ -0.58
GTF3C1-201ENST00000356183 TBCELQ5QJ74 424 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms