RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SIK2Q9H0K1 926 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARHGAP20Q9P2F6 1191 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 POLR1AO95602 1720 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 BNIP3LO60238 219 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CAPN1P07384 714 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 GPD1P21695 349 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CCDC149Q6ZUS6 474 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ASIC4Q96FT7 647 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CD274Q9NZQ7 290 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 GZMAP12544 262 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 PTGER2P43116 358 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CHN2P52757 468 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 WDR72Q3MJ13 1102 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 LINC00523Q86TU6 105 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATPAF2Q8N5M1 289 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 RPL26L1Q9UNX3 145 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TSC22D2O75157 780 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 COG2Q14746 738 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 NANOGNBQ7Z5D8 188 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 PRCCQ92733 491 aaPredicted RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 OLFM1Q99784 485 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 LRRC74AQ0VAA2 488 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 MTFR1Q15390 333 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 SPDYE7PQ495Y7 208 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TBCELQ5QJ74 424 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 C11orf63Q6NUN7 778 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TTC27Q6P3X3 843 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATG4AQ8WYN0 398 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 THUMPD3Q9BV44 507 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 LRRC7Q96NW7 1537 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 EEF2KO00418 725 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 DGAT1O75907 488 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 MCL1Q07820 350 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 GTF2H3Q13889 308 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 RGS21Q2M5E4 152 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 OR6Y1Q8NGX8 325 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 LRFN2Q9ULH4 789 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 SHROOM2Q13796 1616 aa13.18□□□□□ -0.3
SYNCRIP-201ENST00000355238 TBC1D12O60347 775 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARIH2O95376 493 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 CDK16Q00536 496 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SCARF1Q14162 830 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 TTMPQ5BVD1 217 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 PKN3Q6P5Z2 889 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 FAM153BP0C7A2 387 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 KRT20P35900 424 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 FAM153CQ494X1 144 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 BOLA3Q53S33 107 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 PLGRKTQ9HBL7 147 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 CNTNAP5Q8WYK1 1306 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SMNDC1O75940 238 aaKnown RBP eCLIP13.17□□□□□ -0.38e-8■■■□□ 15.9
SYNCRIP-201ENST00000355238 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ERVK-9P63128 1117 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 WASHC5Q12768 1159 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SLC45A4Q5BKX6 768 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 PRMT9Q6P2P2 845 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 CENPLQ8N0S6 344 aaPredicted RBP13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 STK39Q9UEW8 545 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 F5H6K3 240 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 CLOCKO15516 846 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 CBFA2T3O75081 653 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 UNC5CO95185 931 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 KLRC3Q07444 240 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 RNF43Q68DV7 783 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 DLG3Q92796 817 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 KLHL3Q9UH77 587 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms