RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 ZNF667Q5HYK9 610 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 ANKRD20A2Q5SQ80 823 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 ANKRD20A1Q5TYW2 823 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 ANKRD20A3Q5VUR7 823 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 LLGL2Q6P1M3 1020 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 PHLDB2Q86SQ0 1253 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 C11orf70Q9BRQ4 267 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 DPH5Q9H2P9 285 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 CPSF2Q9P2I0 782 aaKnown RBP19.62■□□□□ 0.73
SPNS1-204ENST00000352260 ANAPC7Q9UJX3 599 aa19.62■□□□□ 0.73
SPNS1-204ENST00000352260 HSPA1AP0DMV8 641 aaKnown RBP19.61■□□□□ 0.73
SPNS1-204ENST00000352260 HSPA1BP0DMV9 641 aaKnown RBP19.61■□□□□ 0.73
SPNS1-204ENST00000352260 CCNB1P14635 433 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 ATP5DP30049 168 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 PEX5P50542 639 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 YWHAEP62258 255 aaKnown RBP19.61■□□□□ 0.73
SPNS1-204ENST00000352260 PTP4A2Q12974 167 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 TMEM132DQ14C87 1099 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 ZNF394Q53GI3 561 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 LIN9Q5TKA1 542 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 MFN1Q8IWA4 741 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 OSMRQ99650 979 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 BCO2Q9BYV7 579 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 ADAM22Q9P0K1 906 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 PODXLO00592 558 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 SPOPO43791 374 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 SKAP2O75563 359 aaPredicted RBP19.61■□□□□ 0.73
SPNS1-204ENST00000352260 ATP5HO75947 161 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 NPTXRO95502 500 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 HOXA11P31270 313 aaPredicted RBP19.61■□□□□ 0.73
SPNS1-204ENST00000352260 RAP1GAPP47736 663 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 PPP1R2P3Q6NXS1 205 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 CATSPER4Q7RTX7 472 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 VCPIP1Q96JH7 1222 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 LRRC42Q9Y546 428 aa19.61■□□□□ 0.73
SPNS1-204ENST00000352260 SHBGP04278 402 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 DARSP14868 501 aaKnown RBP19.6■□□□□ 0.73
SPNS1-204ENST00000352260 ATICP31939 592 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 MRPS35P82673 323 aaKnown RBP19.6■□□□□ 0.73
SPNS1-204ENST00000352260 PARP6Q2NL67 630 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 AADACL2Q6P093 401 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 TRPV1Q8NER1 839 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 RNF217Q8TC41 542 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 SH3TC2Q8TF17 1288 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 DNAJB3Q8WWF6 145 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 RNF25Q96BH1 459 aaPredicted RBP19.6■□□□□ 0.73
SPNS1-204ENST00000352260 GRAMD1AQ96CP6 724 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 SDCBP2Q9H190 292 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 RNF186Q9NXI6 227 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 C2CD2Q9Y426 696 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 PCDHA3Q9Y5H8 950 aa19.6■□□□□ 0.73
SPNS1-204ENST00000352260 TREHO43280 583 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 CA12O43570 354 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 POLR2BP30876 1174 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 ZNF200P98182 395 aaPredicted RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 C1QBPQ07021 282 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 LBRQ14739 615 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 FSCN1Q16658 493 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 WDR72Q3MJ13 1102 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 RNF43Q68DV7 783 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 TFAP2BQ92481 460 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 NAF1Q96HR8 494 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 CELF4Q9BZC1 486 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 VRTNQ9H8Y1 702 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 LSM8O95777 96 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 AKR1A1P14550 325 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 APBB1IPQ7Z5R6 666 aaPredicted RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 NT5DC4Q86YG4 428 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 REM2Q8IYK8 340 aaPredicted RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 ZFAND2BQ8WV99 257 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 KATNAL1Q9BW62 490 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 SMYD3Q9H7B4 428 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 PCDHGC3Q9UN70 934 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 RPL26L1Q9UNX3 145 aaKnown RBP19.59■□□□□ 0.73
SPNS1-204ENST00000352260 NR2E1Q9Y466 385 aa19.59■□□□□ 0.73
SPNS1-204ENST00000352260 TRPA1O75762 1119 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 RARGP13631 454 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 CHRNA3P32297 505 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 CDH8P55286 799 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 PLEKHA7Q6IQ23 1121 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 SLC27A1Q6PCB7 646 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 ZDHHC24Q6UX98 284 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 LMNTD2Q8IXW0 634 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 TRIM51Q9BSJ1 452 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 EIF2AQ9BY44 585 aaKnown RBP19.58■□□□□ 0.72
SPNS1-204ENST00000352260 SNTG2Q9NY99 539 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 PRKAG3Q9UGI9 489 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 ITGA11Q9UKX5 1188 aa19.58■□□□□ 0.72
SPNS1-204ENST00000352260 C17orf102A2RUQ5 167 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 MYADML2A6NDP7 307 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 RASGRF2O14827 1237 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 KRT16P08779 473 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 LINGO3P0C6S8 592 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 MMP8P22894 467 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 PURAQ00577 322 aaKnown RBP19.57■□□□□ 0.72
SPNS1-204ENST00000352260 MAMLD1Q13495 774 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 SLC29A2Q14542 456 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 PCBP1Q15365 356 aaKnown RBP eCLIP19.57■□□□□ 0.724e-7■■■■■ 29.2
SPNS1-204ENST00000352260 TAF11Q15544 211 aa19.57■□□□□ 0.72
SPNS1-204ENST00000352260 PDCD2Q16342 344 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms