RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TAMM41Q96BW9 452 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 FGFBP2Q9BYJ0 223 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 THAP2Q9H0W7 228 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TFCP2L1Q9NZI6 479 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 ZC3H11AO75152 810 aaKnown RBP eCLIP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 FAM58BPP0C7Q3 252 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PRKACBP22694 351 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 SCNN1DP51172 638 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 CTBSQ01459 385 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 STAT4Q14765 748 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 EDRF1Q3B7T1 1238 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TMTC4Q5T4D3 741 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF276Q8N554 614 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PDZD8Q8NEN9 1154 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 OR7G1Q8NGA0 311 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 EGLN2Q96KS0 407 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PALMDQ9NP74 551 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 SEPT11Q9NVA2 429 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 SMG5Q9UPR3 1016 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 CHD4Q14839 1912 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CAPN14A8MX76 684 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 TTC34A8MYJ7 566 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 VDRP11473 427 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 RAB15P59190 212 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 HIC1Q14526 733 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 PRPF39Q86UA1 669 aaKnown RBP11.12□□□□□ -0.63
CAPN3-203ENST00000349748 THAP11Q96EK4 314 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 WHRNQ9P202 907 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 ANAPC5Q9UJX4 755 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CORINQ9Y5Q5 1042 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 E5RJQ4 531 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 SIN3BO75182 1162 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 SULT1C4O75897 302 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 KRT75O95678 551 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 HMOX2P30519 316 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 TECP42680 631 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 GPC3P51654 580 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 AMPD3Q01432 767 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CRY1Q16526 586 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 COBLL1Q53SF7 1204 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 TCHHL1Q5QJ38 904 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-203ENST00000349748 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 SIGIRRQ6IA17 410 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 RNF19BQ6ZMZ0 732 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 DGKHQ86XP1 1220 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CLVS1Q8IUQ0 354 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-203ENST00000349748 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-203ENST00000349748 ZBTB38Q8NAP3 1195 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-203ENST00000349748 PCYOX1LQ8NBM8 494 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 TSPAN14Q8NG11 270 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 KLC2Q9H0B6 622 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 CDH19Q9H159 772 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 QPCTLQ9NXS2 382 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 ERVK-11Q9UQG0 969 aa11.12□□□□□ -0.63
CAPN3-203ENST00000349748 PSMD11O00231 422 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PSMD12O00232 456 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PLS3P13797 630 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 IVDP26440 423 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CDKL1Q00532 357 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 KCNC4Q03721 635 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ITGADQ13349 1161 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SEC23AQ15436 765 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SIX1Q15475 284 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 DNAL1Q4LDG9 190 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SEL1L2Q5TEA6 688 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SPERTQ8NA61 448 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SNF8Q96H20 258 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 FAR2Q96K12 515 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 NUDT12Q9BQG2 462 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 HERC2P3Q9BVR0 1158 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 Q9H521 79 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 IGSF9Q9P2J2 1179 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF536O15090 1300 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 GSG1L2A8MUP6 293 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 H3BNX3 289 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 SLC26A4O43511 780 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 PTPN2P17706 415 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 DDX5P17844 614 aaKnown RBP11.11□□□□□ -0.63
CAPN3-203ENST00000349748 ITIH2P19823 946 aa11.11□□□□□ -0.63
CAPN3-203ENST00000349748 CD247P20963 164 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms