RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CUL1Q13616 776 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 BYSLQ13895 437 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 PDIA5Q14554 519 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF268Q14587 947 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MTHFD1LQ6UB35 978 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TEPPQ6URK8 271 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ARHGAP36Q6ZRI8 547 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM26EQ8N5C1 309 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MB21D1Q8N884 522 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 VGLL2Q8N8G2 317 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MIPOL1Q8TD10 442 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 EDC3Q96F86 508 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TOE1Q96GM8 510 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 IFT74Q96LB3 600 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 FOXP1Q9H334 677 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 GREM2Q9H772 168 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 PAG1Q9NWQ8 432 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 SLC5A4Q9NY91 659 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MAGEC2Q9UBF1 373 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 SLC12A6Q9UHW9 1150 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 SLC12A4Q9UP95 1085 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 COQ6Q9Y2Z9 468 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TNPO3Q9Y5L0 923 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MAST3O60307 1309 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 LTBP1Q14766 1721 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CACNA1SQ13698 1873 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 MAST2Q6P0Q8 1798 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 TTC26A0AVF1 554 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 B4E1Z4 1266 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 E7ENQ6 273 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 ACOT7O00154 380 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CAND2O75155 1236 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 HEXIM1O94992 359 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 KRT14P02533 472 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 NQO1P15559 274 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 PI3P19957 117 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 HPDP32754 393 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 RFC4P35249 363 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 MXRA7P84157 204 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CUL3Q13618 768 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 LAMB3Q13751 1172 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF460Q14592 562 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 EZH2Q15910 746 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CRY1Q16526 586 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 VWA3BQ502W6 1294 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 LRRC24Q50LG9 513 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 RRAGBQ5VZM2 374 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 DDX46Q7L014 1031 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 ARHGAP22Q7Z5H3 698 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 APBB1IPQ7Z5R6 666 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 KIRREL3Q8IZU9 778 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 NLGN4XQ8N0W4 816 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 SYNE4Q8N205 404 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 GALNT15Q8N3T1 639 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 SMCR8Q8TEV9 937 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 FNIP1Q8TF40 1166 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 RAPGEF5Q92565 580 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 FERMT2Q96AC1 680 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CHMP6Q96FZ7 201 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 BORCS6Q96GS4 357 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 PAGE5Q96GU1 130 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF570Q96NI8 536 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 NOX5Q96PH1 765 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 THAP9Q9H5L6 903 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 SH2D4AQ9H788 454 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 PAPOLBQ9NRJ5 636 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 CATSPERZQ9NTU4 200 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 NUB1Q9Y5A7 615 aa8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 PDS5AQ29RF7 1337 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-204ENST00000349311 NID2Q14112 1375 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 COL4A1P02462 1669 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 PJA2O43164 708 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 DIAPH2O60879 1101 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CLASP2O75122 1294 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 SMIM24O75264 130 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CLTAP09496 248 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 LINGO3P0C6S8 592 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 FAHP16930 419 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 YBX3P16989 372 aaKnown RBP eCLIP8.25□□□□□ -1.094e-8■□□□□ 8.6
UBE2D3-204ENST00000349311 ALDH3A1P30838 453 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 LIMS1P48059 325 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 TAF11Q15544 211 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CCDC96Q2M329 555 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 SGSM1Q2NKQ1 1148 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 TBC1D25Q3MII6 688 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 LRRC23Q53EV4 343 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 TM4SF20Q53R12 229 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF385BQ569K4 471 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 ODF2Q5BJF6 829 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms