RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SHISA4Q96DD7 197 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 TMEM120AQ9BXJ8 343 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 LRRC19Q9H756 370 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 RRAGCQ9HB90 399 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 OTUD4Q01804 1114 aaKnown RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 LRRC36Q1X8D7 754 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 LACTB2Q53H82 288 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 ARID3BQ8IVW6 561 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 SYTL5Q8TDW5 730 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 ABTB1Q969K4 478 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 DRC3Q9H069 523 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 UPF3AQ9H1J1 476 aaKnown RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 ANLNQ9NQW6 1124 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 E7ENQ6 273 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 MCUQ8NE86 351 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 GCNAQ96QF7 691 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 TRIM62Q9BVG3 475 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 FRMD8Q9BZ67 464 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 ERVK-5Q9HDB9 667 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 TGFB1I1O43294 461 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 PAX7P23759 505 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 KCNJ2P63252 427 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 TMED1Q13445 227 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 PDE1CQ14123 709 aaPredicted RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 ABRAQ8N0Z2 381 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 ZCCHC9Q8N567 271 aaKnown RBP15.38■□□□□ 0.05
NUP50-201ENST00000347635 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 TISP43B9A030 160 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 MYL2P10916 166 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 STIP1P31948 543 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 DSG1Q02413 1049 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 EXOC3L1Q86VI1 746 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 ALG3Q92685 438 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 KAT5Q92993 513 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 CLMNQ96JQ2 1002 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PCDH9Q9HC56 1237 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PDP2Q9P2J9 529 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 M0R2N6 131 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PSMD10O75832 226 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 VCPP55072 806 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 STILQ15468 1287 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PKN2Q16513 984 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 RNF43Q68DV7 783 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PDCD2LQ9BRP1 358 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 MTIF3Q9H2K0 278 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 MRPL40Q9NQ50 206 aaKnown RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 MYPNQ86TC9 1320 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PFDN6O15212 129 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 NDUFAF2Q8N183 169 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 SKAP2O75563 359 aaPredicted RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 SETSIPP0DME0 302 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 PECAM1P16284 738 aaPredicted RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 GPD1P21695 349 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 JAM2P57087 298 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 SESN2P58004 480 aaPredicted RBP15.37■□□□□ 0.05
NUP50-201ENST00000347635 KLC3Q6P597 504 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 ELMO3Q96BJ8 720 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 CGRRF1Q99675 332 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 STARD13Q9Y3M8 1113 aa15.37■□□□□ 0.05
NUP50-201ENST00000347635 DCDC2CA8MYV0 355 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 PPP1R11O60927 126 aaPredicted RBP15.36■□□□□ 0.05
NUP50-201ENST00000347635 PTPRAP18433 802 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 TAC1P20366 129 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 DCLK2Q8N568 766 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 CATSPER1Q8NEC5 780 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 MCM8Q9UJA3 840 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 ACTL7BQ9Y614 415 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 SUPT20HL2P0C7V6 817 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 TCF7P36402 384 aaPredicted RBP15.36■□□□□ 0.05
NUP50-201ENST00000347635 XRCC4Q13426 336 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 KPNB1Q14974 876 aaKnown RBP15.36■□□□□ 0.05
NUP50-201ENST00000347635 SLC9A9Q8IVB4 645 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 FAM71AQ8IYT1 594 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 PDZD8Q8NEN9 1154 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 CEP70Q8NHQ1 597 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 PARD3BQ8TEW8 1205 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 SDCCAG3Q96C92 435 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 BFARQ9NZS9 450 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 GRID1Q9ULK0 1009 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 HSPA8P11142 646 aaKnown RBP15.36■□□□□ 0.05
NUP50-201ENST00000347635 EPHB2P29323 1055 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 AGR3Q8TD06 166 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 STK32AQ8WU08 396 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 INPP5DQ92835 1189 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 TRPV6Q9H1D0 765 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 CCDC68Q9H2F9 335 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 UNC5CO95185 931 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 LSM8O95777 96 aaKnown RBP15.36■□□□□ 0.05
NUP50-201ENST00000347635 CHKAP35790 457 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 CMTM5Q96DZ9 223 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
NUP50-201ENST00000347635 TRIM15Q9C019 465 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms