RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 RAD23BP54727 409 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 GJA9P57773 515 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 MAMLD1Q13495 774 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 TRADDQ15628 312 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 GLRA4Q5JXX5 417 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 DAB2IPQ5VWQ8 1189 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 MFSD14CQ5VZR4 134 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
ATG4A-202ENST00000345734 CXCL17Q6UXB2 119 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 HDXQ7Z353 690 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 KRT222Q8N1A0 295 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 SMC1BQ8NDV3 1235 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
ATG4A-202ENST00000345734 TRIM11Q96F44 468 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 APOL6Q9BWW8 343 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 RBCK1Q9BYM8 510 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 ELOVL4Q9GZR5 314 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 ST7Q9NRC1 585 aa9.78□□□□□ -0.84
ATG4A-202ENST00000345734 PIN4Q9Y237 131 aaKnown RBP9.78□□□□□ -0.84
ATG4A-202ENST00000345734 PYGMP11217 842 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 CD19P15391 556 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 ATICP31939 592 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 CTNNA1P35221 906 aaKnown RBP9.77□□□□□ -0.84
ATG4A-202ENST00000345734 YWHAEP62258 255 aaKnown RBP9.77□□□□□ -0.84
ATG4A-202ENST00000345734 RBP5P82980 135 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 GUCY2DQ02846 1103 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 CASP8Q14790 479 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 TSNAXIP1Q2TAA8 658 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 LIN9Q5TKA1 542 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 DENND1BQ6P3S1 775 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 SLC4A11Q8NBS3 891 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 C18orf25Q96B23 403 aaPredicted RBP9.77□□□□□ -0.84
ATG4A-202ENST00000345734 HHIPL1Q96JK4 782 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 SNX27Q96L92 541 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 EPB41L5Q9HCM4 733 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 GDF3Q9NR23 364 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 IGSF5Q9NSI5 407 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 TUBGCP4Q9UGJ1 667 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 ITGA11Q9UKX5 1188 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 PCDHA3Q9Y5H8 950 aa9.77□□□□□ -0.84
ATG4A-202ENST00000345734 TTC36A6NLP5 189 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 MYO1FO00160 1098 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 SART1O43290 800 aaKnown RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CILPO75339 1184 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 RECQL4O94761 1208 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 MMP8P22894 467 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CTNNA2P26232 953 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CARSP49589 748 aaKnown RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CACNB2Q08289 660 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 LLGL1Q15334 1064 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 PLEKHA7Q6IQ23 1121 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 ZDHHC14Q8IZN3 488 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 AENQ8WTP8 325 aaKnown RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CASKIN2Q8WXE0 1202 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 WNT8BQ93098 351 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 VCPIP1Q96JH7 1222 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 INSM2Q96T92 566 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 MTG1Q9BT17 334 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
ATG4A-202ENST00000345734 RASSF4Q9H2L5 321 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 DONSONQ9NYP3 566 aa9.77□□□□□ -0.85
ATG4A-202ENST00000345734 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 TCRBV7S2A1N4TA0A589 114 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CCDC188H7C350 402 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 LSM8O95777 96 aaKnown RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 GNAT1P11488 350 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 ELNP15502 786 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CALRP27797 417 aaKnown RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CCND3P30281 292 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CRYBB1P53674 252 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 RPL7AP62424 266 aaKnown RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 MAP9Q49MG5 647 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CYP4A22Q5TCH4 519 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 GDF6Q6KF10 455 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CD302Q8IX05 232 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 TMEM35BQ8NCS4 154 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 IFT81Q8WYA0 676 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 RUBCNQ92622 972 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CELF4Q9BZC1 486 aaKnown RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 PLEKHA5Q9HAU0 1116 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 TJP2Q9UDY2 1190 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 AMACRQ9UHK6 382 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CYTH4Q9UIA0 394 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 O00370 1275 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 TLR3O15455 904 aaKnown RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 SEPT4O43236 478 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 PAEPP09466 180 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 P4HA1P13674 534 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 TNFRSF8P28908 595 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 AXLP30530 894 aa9.76□□□□□ -0.85
ATG4A-202ENST00000345734 CDH5P33151 784 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-202ENST00000345734 YARSP54577 528 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms