RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PRRC2BQ5JSZ5 2229 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 TOMM70O94826 608 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 FIGNQ5HY92 759 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 KCNT1Q5JUK3 1230 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 C6orf10Q5SRN2 563 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 TRIM45Q9H8W5 580 aaPredicted RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 CTDNEP1O95476 244 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 LYNP07948 512 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 TBXAS1P24557 533 aaPredicted RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 TFAMQ00059 246 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 BNC1Q01954 994 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 EDRF1Q3B7T1 1238 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 BNIPLQ7Z465 357 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 CDC26Q8NHZ8 85 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 E9PBE3 544 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 SMAD1Q15797 465 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 HEATR6Q6AI08 1181 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 ARHGEF26Q96DR7 871 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 OSBPL11Q9BXB4 747 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 CCSER2Q9H7U1 834 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 CLK4Q9HAZ1 481 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 FLT1P17948 1338 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 PNMA6FA0A0J9YX94 578 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 PROSER3Q2NL68 480 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 PROX1Q92786 737 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 EBF2Q9HAK2 575 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 NGRNQ9NPE2 291 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 USP32Q8NFA0 1604 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 HEATR9A2RTY3 570 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 KCNN4O15554 427 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 FBXO11Q86XK2 927 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 PSMA8Q8TAA3 256 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 UBE2OQ9C0C9 1292 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 GRM1Q13255 1194 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 FAAH2Q6GMR7 532 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 PRMT9Q6P2P2 845 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 POU5F2Q8N7G0 328 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 RBBP8Q99708 897 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 ITM2BQ9Y287 266 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 NOS1APO75052 506 aaPredicted RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 TFE3P19532 575 aaPredicted RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 IFNA8P32881 189 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 HADHAP40939 763 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 TYSND1Q2T9J0 566 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 GPATCH4Q5T3I0 446 aaKnown RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 DPP8Q6V1X1 898 aaPredicted RBP14.13□□□□□ -0.15
TRIO-202ENST00000344204 NEUROG2Q9H2A3 272 aa14.13□□□□□ -0.15
TRIO-202ENST00000344204 P4HBP07237 508 aaKnown RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 CCNA2P20248 432 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 RTP1P59025 263 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 C15orf59Q2T9L4 293 aaPredicted RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 RMDN1Q96DB5 314 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 FRMD8Q9BZ67 464 aaPredicted RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 GRPEL2Q8TAA5 225 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 BDH2Q9BUT1 245 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MOSPD1Q9UJG1 213 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 ZNF221Q9UK13 617 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 HMGB2P26583 209 aaKnown RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 SPIDRQ14159 915 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MROH9Q5TGP6 573 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 FAM45BPQ6NSW5 357 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 LRRC20Q8TCA0 184 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 APOPT1Q96IL0 206 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 ITGA4P13612 1032 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 LRPAP1P30533 357 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MARCH10Q8NA82 808 aaPredicted RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 TSPAN17Q96FV3 270 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 HPSEQ9Y251 543 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MRPL11Q9Y3B7 192 aaKnown RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 CDC42BPGQ6DT37 1551 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 TRAF3Q13114 568 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 BHLHE22Q8NFJ8 381 aaPredicted RBP14.12□□□□□ -0.15
TRIO-202ENST00000344204 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 A0A1W2PQ72 361 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 PIK3CDO00329 1044 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 FGFR3P22607 806 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 GRIK3Q13003 919 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 KBTBD2Q8IY47 623 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 FSD1LQ9BXM9 530 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 ATPIF1Q9UII2 106 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 MMP13P45452 471 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 CDH6P55285 790 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 SH3D19Q5HYK7 790 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 DGKHQ86XP1 1220 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 P3H2Q8IVL5 708 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 SNX19Q92543 992 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 RABL2BQ9UNT1 228 aa14.12□□□□□ -0.15
TRIO-202ENST00000344204 NSUN2Q08J23 767 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRIO-202ENST00000344204 RBM47A0AV96 593 aaKnown RBP14.11□□□□□ -0.15
TRIO-202ENST00000344204 GAS2O43903 313 aaKnown RBP14.11□□□□□ -0.15
TRIO-202ENST00000344204 ENO2P09104 434 aaPredicted RBP14.11□□□□□ -0.15
TRIO-202ENST00000344204 KRT20P35900 424 aa14.11□□□□□ -0.15
TRIO-202ENST00000344204 SLC15A2Q16348 729 aa14.11□□□□□ -0.15
TRIO-202ENST00000344204 SVOPQ8N4V2 548 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms