RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 MAN2B1O00754 1011 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 ATP2C2O75185 946 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 GDI1P31150 447 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 PIK3CAP42336 1068 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 TUFMP49411 452 aaKnown RBP19.23■□□□□ 0.67
USF2-202ENST00000343550 CDH8P55286 799 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 CSTF1Q05048 431 aaKnown RBP19.23■□□□□ 0.67
USF2-202ENST00000343550 TCERG1LQ5VWI1 586 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 TMC8Q8IU68 726 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 OR6B3Q8NGW1 331 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 SPPL2BQ8TCT7 592 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 DEPDC1BQ8WUY9 529 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 SLC35C1Q96A29 364 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 SLITRK6Q9H5Y7 841 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 CDH9Q9ULB4 789 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 MIA3Q5JRA6 1907 aa19.23■□□□□ 0.67
USF2-202ENST00000343550 GVINP1Q7Z2Y8 2422 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 A0A1W2PRU2 124 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 MYBPHLA2RUH7 354 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 NLRP12P59046 1061 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 NFE2Q16621 373 aaPredicted RBP19.22■□□□□ 0.67
USF2-202ENST00000343550 DCAF17Q5H9S7 520 aaPredicted RBP19.22■□□□□ 0.67
USF2-202ENST00000343550 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 MFSD6LQ8IWD5 586 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 SEMA4DQ92854 862 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 ABI2Q9NYB9 513 aaPredicted RBP19.22■□□□□ 0.67
USF2-202ENST00000343550 ASB3Q9Y575 518 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 PCDHB5Q9Y5E4 795 aa19.22■□□□□ 0.67
USF2-202ENST00000343550 DCHS1Q96JQ0 3298 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 ZNF263O14978 683 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 SOAT2O75908 522 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 MBD3O95983 291 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 HAPLN1P10915 354 aaPredicted RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 P4HA1P13674 534 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 ID4P47928 161 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 MXI1P50539 228 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 FOXK2Q01167 660 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 DPCR1Q3MIW9 517 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 CCDC40Q4G0X9 1142 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 CBWD6Q4V339 395 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 CBWD3Q5JTY5 395 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 CBWD5Q5RIA9 395 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 DNAJB7Q7Z6W7 309 aaPredicted RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 ZNF687Q8N1G0 1237 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 FBXL13Q8NEE6 735 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 E2F7Q96AV8 911 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 SYT15Q9BQS2 421 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 SDCBP2Q9H190 292 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 SMYD3Q9H7B4 428 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 APOBEC3GQ9HC16 384 aaKnown RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.21■□□□□ 0.674e-9■■■■■ 50.5
USF2-202ENST00000343550 RAB20Q9NX57 234 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 NDRG2Q9UN36 371 aaKnown RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 COQ4Q9Y3A0 265 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 WDR87Q6ZQQ6 2873 aa19.21■□□□□ 0.67
USF2-202ENST00000343550 EP300Q09472 2414 aaPredicted RBP19.21■□□□□ 0.67
USF2-202ENST00000343550 HEPACAM2A8MVW5 462 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 CLSTN1O94985 981 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 GNA14O95837 355 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 MARSP56192 900 aaKnown RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 MGAT5BQ3V5L5 792 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 SUMF1Q8NBK3 374 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 ATRIPQ8WXE1 791 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 RUBCNQ92622 972 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 PSMG2Q969U7 264 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 SEPT5Q99719 369 aaPredicted RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 HINFPQ9BQA5 517 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 IMPG2Q9BZV3 1241 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 PCDHGA2Q9Y5H1 932 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 SPTBN4Q9H254 2564 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 A8MXQ7 604 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 FGFR1OPO95684 399 aaKnown RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 PTPN1P18031 435 aaKnown RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 CYP2F1P24903 491 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 ASPAP45381 313 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 PSMC1P62191 440 aaKnown RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 NOP14P78316 857 aaKnown RBP19.2■□□□□ 0.66
USF2-202ENST00000343550 MTAPQ13126 283 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 GAREM2Q75VX8 874 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 FAM3CQ92520 227 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 ABCB6Q9NP58 842 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 PIAS3Q9Y6X2 628 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 NCANO14594 1321 aa19.2■□□□□ 0.66
USF2-202ENST00000343550 FRYLO94915 3013 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 ATF6P18850 670 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 MAPRE1Q15691 268 aaKnown RBP19.19■□□□□ 0.66
USF2-202ENST00000343550 CFAP221Q4G0U5 840 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 STXBP5Q5T5C0 1151 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 SCARA5Q6ZMJ2 495 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 ITIH5Q86UX2 942 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 SPATA2LQ8IUW3 424 aaPredicted RBP19.19■□□□□ 0.66
USF2-202ENST00000343550 ARID3BQ8IVW6 561 aaPredicted RBP19.19■□□□□ 0.66
USF2-202ENST00000343550 TRIM59Q8IWR1 403 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 KIAA2013Q8IYS2 634 aa19.19■□□□□ 0.66
USF2-202ENST00000343550 ZBTB44Q8NCP5 570 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms