RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CLIC4Q9Y696 253 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 UBA6A0AVT1 1052 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 TLR2O60603 784 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 GPC5P78333 572 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 CACHD1Q5VU97 1274 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FAM173BQ6P4H8 233 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SHQ1Q6PI26 577 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 TMED8Q6PL24 325 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ZNF564Q8TBZ8 553 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 MMTAG2Q9BU76 263 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 ANO3Q9BYT9 981 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ILKAPQ9H0C8 392 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 INTS2Q9H0H0 1204 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 LMO7Q8WWI1 1683 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PSMD14O00487 310 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FASP25445 335 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FNTAP49354 379 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 AP3S2P59780 193 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 WDR93Q6P2C0 686 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 CENPLQ8N0S6 344 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 RAB42Q8N4Z0 105 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 CCDC126Q96EE4 140 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SIPA1Q96FS4 1042 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 BCL2L14Q9BZR8 327 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 MED28Q9H204 178 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SLC9A2Q9UBY0 812 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 LRRC53A6NM62 1247 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 COBLO75128 1261 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PPM1BO75688 479 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 VAV1P15498 845 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 EIF2AK2P19525 551 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 GEMIN4P57678 1058 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 SRP54P61011 504 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 CYP4Z1Q86W10 505 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RNF135Q8IUD6 432 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SLC9A7Q96T83 725 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 H7C2Y5 167 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 GHRP10912 638 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 GP5P40197 560 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PHC1P78364 1004 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FAM83BQ5T0W9 1011 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 NLRX1Q86UT6 975 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 VMP1Q96GC9 406 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 NDNQ99608 321 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 DCLK3Q9C098 648 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 NYXQ9GZU5 481 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 KLHL1Q9NR64 748 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 LMCD1Q9NZU5 365 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 GSTK1Q9Y2Q3 226 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 HEY1Q9Y5J3 304 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 LAMB1P07942 1786 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ADGRA2Q96PE1 1338 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 C15orf38-AP3S2A0A0A6YYH1 394 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 DDX39AO00148 427 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 PSMD11O00231 422 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PRMT3O60678 531 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FSHRP23945 695 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FAUP35544 74 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 GPR1P46091 355 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 CDH6P55285 790 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 DUS1LQ6P1R4 473 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 TBC1D19Q8N5T2 526 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ASB12Q8WXK4 309 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 MYDGFQ969H8 173 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FAM227BQ96M60 508 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 VPS33BQ9H267 617 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RERGLQ9H628 205 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 MARCH7Q9H992 704 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RIC8BQ9NVN3 520 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FHOD1Q9Y613 1164 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RWDD4Q6NW29 188 aaKnown RBP6.37□□□□□ -1.39
VCAN-203ENST00000343200 ATL2Q8NHH9 583 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 MXD3Q9BW11 206 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 TMEM168Q9H0V1 697 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 TRMT13Q9NUP7 481 aaKnown RBP6.37□□□□□ -1.39
VCAN-203ENST00000343200 IP6K2Q9UHH9 426 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 PRDM4Q9UKN5 801 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 EDARQ9UNE0 448 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 SNX7Q9UNH6 387 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 POFUT2Q9Y2G5 429 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 ZC3H13Q5T200 1668 aaKnown RBP6.37□□□□□ -1.39
VCAN-203ENST00000343200 TRAPPC8Q9Y2L5 1435 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 M0QX08 132 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 AKAP8O43823 692 aaKnown RBP6.37□□□□□ -1.39
VCAN-203ENST00000343200 ATP1A1P05023 1023 aaKnown RBP6.37□□□□□ -1.39
VCAN-203ENST00000343200 APRTP07741 180 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 THRAP10827 490 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 CDH18Q13634 790 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 SMU1Q2TAY7 513 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 RAB43Q86YS6 212 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 PDPRQ8NCN5 879 aa6.37□□□□□ -1.39
VCAN-203ENST00000343200 MYLPFQ96A32 169 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms