RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TCEAL4Q96EI5 215 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TWNKQ96RR1 684 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 BPIFA3Q9BQP9 254 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NAT10Q9H0A0 1025 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF334Q9HCZ1 680 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PNPLA8Q9NP80 782 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 COMMD8Q9NX08 183 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KIAA1257Q9ULG3 409 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC38A8A6NNN8 435 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ECI2O75521 394 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 F11P03951 625 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CD58P19256 250 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GABRR2P28476 465 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GPR15P49685 360 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZXDAP98168 799 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MYL5Q02045 173 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ARHGAP15Q53QZ3 475 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GBP6Q6ZN66 633 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DENND5BQ6ZUT9 1274 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SMARCD2Q92925 531 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ASB16Q96NS5 453 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ARID3AQ99856 593 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NDST4Q9H3R1 872 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SAMSN1Q9NSI8 373 aaKnown RBP13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 F8VP50 259 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PAEPP09466 180 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PFKLP17858 780 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 RAD23BP54727 409 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 EXOC3L4Q17RC7 722 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MIIPQ5JXC2 388 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ARHGAP17Q68EM7 881 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 C11orf57Q6ZUT1 292 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TMEM150AQ86TG1 271 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PPM1KQ8N3J5 372 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC44A3Q8N4M1 653 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC2A14Q8TDB8 520 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ING5Q8WYH8 240 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ELSPBP1Q96BH3 223 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CYFIP2Q96F07 1278 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TMEM30AQ9NV96 361 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DUSP12Q9UNI6 340 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CNTN6Q9UQ52 1028 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NOTCH4Q99466 2003 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FAM92AA1XBS5 289 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CLDN5O00501 218 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GPR37L1O60883 481 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ASGR2P07307 311 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ACO1P21399 889 aaKnown RBP13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SIGLEC14Q08ET2 396 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TEAD2Q15562 447 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 POTEHQ6S545 545 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PARM1Q6UWI2 310 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NUP93Q8N1F7 819 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GPR152Q8TDT2 470 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 OVCA2Q8WZ82 227 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FGF14Q92915 247 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 HEXIM2Q96MH2 286 aaKnown RBP13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KRT82Q9NSB4 513 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 OBP2AQ9NY56 170 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NCANO14594 1321 aa13.87□□□□□ -0.19
HLA-DQA1-201ENST00000343139 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 AP1G2O75843 785 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FAM200BP0CF97 657 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CCDC130P13994 396 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FCARP24071 287 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CDR1P51861 262 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CACNA2D1P54289 1103 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 LRMPQ12912 555 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FAM78AQ5JUQ0 283 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PHLDB3Q6NSJ2 640 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms