RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PRR12Q9ULL5 1215 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ZNRF3Q9ULT6 936 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 SORCS3Q9UPU3 1222 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 A0A088AWK7 358 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TCRBV5S1A1TA0A578 114 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 GNPATO15228 680 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TMCC1O94876 653 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ITGA2BP08514 1039 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 POLR2MP0CAP2 368 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 SMIM18P0DKX4 95 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TCF4P15884 667 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ATF7P17544 494 aaPredicted RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 AOC1P19801 751 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ACO1P21399 889 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CCNFP41002 786 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 BTKQ06187 659 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 PTK7Q13308 1070 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 MAP7Q14244 749 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 R3HDM1Q15032 1099 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ATP13A4Q4VNC1 1196 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 SFT2D3Q587I9 215 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TFDP3Q5H9I0 405 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RNF111Q6ZNA4 994 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RPGRQ92834 1020 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TTC17Q96AE7 1141 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TTC1Q99614 292 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM121Q9BTD3 319 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 THTPAQ9BU02 230 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 PARVAQ9NVD7 372 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 GALNT8Q9NY28 637 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 SIRPGQ9P1W8 387 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 HSFX1Q9UBD0 423 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TBX20Q9UMR3 447 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 USTQ9Y2C2 406 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 EFR3BQ9Y2G0 817 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM191CA6NGB0 347 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SGK1O00141 431 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SLC16A4O15374 487 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ZNF862O60290 1169 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM63AO94886 807 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SERPINA6P08185 405 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM191BP0C7N4 346 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ETS2P15036 469 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MAGEA8P43361 318 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MED21Q13503 144 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SH2D4BQ5SQS7 431 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PLA2G4FQ68DD2 849 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SLC39A4Q6P5W5 647 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 RFX8Q6ZV50 586 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MIER3Q7Z3K6 550 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 AMIGO3Q86WK7 504 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ZFPM1Q8IX07 1006 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ALDH16A1Q8IZ83 802 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM161BQ8NDZ6 487 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 JADE3Q92613 823 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 BTBD9Q96Q07 612 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 COA1Q9GZY4 146 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 DDX56Q9NY93 547 aaKnown RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PPARGC1AQ9UBK2 798 aaKnown RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 RPS6KL1Q9Y6S9 549 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 A6NJR5 290 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 GOLGA8MH3BSY2 632 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PEX1O43933 1283 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SNNO75324 88 aaPredicted RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SPAG6O75602 509 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 C1QAP02745 245 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 CCDC166P0CW27 439 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 INHBCP55103 352 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 CLDN10P78369 228 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 FAAP100Q0VG06 881 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 IKQ13123 557 aaPredicted RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ANKRD20A4Q4UJ75 823 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM259Q4ZIN3 620 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 EFHC1Q5JVL4 640 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MAP3K21Q5TCX8 1036 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ATG16L1Q676U5 607 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 UGT2A3Q6UWM9 527 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 NIPA2Q8N8Q9 360 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 APBB2Q92870 758 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PRICKLE1Q96MT3 831 aaPredicted RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MXRA8Q9BRK3 442 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 SOX13Q9UN79 622 aa10.1□□□□□ -0.79
HOXA1-201ENST00000343060 MYH9P35579 1960 aaKnown RBP10.1□□□□□ -0.79
HOXA1-201ENST00000343060 C3orf70A6NLC5 250 aaPredicted RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 I3L4J1 428 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms