RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DNERQ8NFT8 737 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PRMT1Q99873 361 aaKnown RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 ZDHHC9Q9Y397 364 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 SPHKAPQ2M3C7 1700 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 NFIBO00712 420 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 MED24O75448 989 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CARSP49589 748 aaKnown RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 BTG3Q14201 252 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CLEC16AQ2KHT3 1053 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 TIGD7Q6NT04 549 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PHACTR4Q8IZ21 702 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 HPS4Q9NQG7 708 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 TRIM17Q9Y577 477 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 A0A1W2PQJ5 194 aa15.58■□□□□ 0.09
UBE3B-202ENST00000342494 MAP3K7CLP57077 242 aa15.58■□□□□ 0.09
UBE3B-202ENST00000342494 FAM83EQ2M2I3 478 aa15.58■□□□□ 0.09
UBE3B-202ENST00000342494 TTC39BQ5VTQ0 682 aaPredicted RBP15.58■□□□□ 0.09
UBE3B-202ENST00000342494 UBXN6Q9BZV1 441 aa15.58■□□□□ 0.09
UBE3B-202ENST00000342494 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.09
UBE3B-202ENST00000342494 FBXO21O94952 628 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 RHOAP61586 193 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 NR1I3Q14994 352 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 CEP70Q8NHQ1 597 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 GTF3C4Q9UKN8 822 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 EVPLLA8MZ36 301 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 KCNV2Q8TDN2 545 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 FAM162AQ96A26 154 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 RTFDC1Q9BY42 306 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-202ENST00000342494 GLIS2Q9BZE0 524 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-202ENST00000342494 COPS7BQ9H9Q2 264 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-202ENST00000342494 STRNO43815 780 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 DDX39BQ13838 428 aaKnown RBP15.58■□□□□ 0.08
UBE3B-202ENST00000342494 FAM83AQ86UY5 434 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 ZNF555Q8NEP9 628 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 CGRRF1Q99675 332 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 NPHS2Q9NP85 383 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 XPNPEP3Q9NQH7 507 aa15.58■□□□□ 0.08
UBE3B-202ENST00000342494 AAR2Q9Y312 384 aaKnown RBP15.58■□□□□ 0.08
UBE3B-202ENST00000342494 AKR1A1P14550 325 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 TGM2P21980 687 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 KLK7P49862 253 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 RAB27AP51159 221 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 ITGA8P53708 1063 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 KCNK10P57789 538 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 CAMK2GQ13555 558 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 STARD3Q14849 445 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 SLFN11Q7Z7L1 901 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 JADE3Q92613 823 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 C17orf80Q9BSJ5 609 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 TSEN34Q9BSV6 310 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 FRMD8Q9BZ67 464 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 IRX2Q9BZI1 471 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 KLRC2P26717 231 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 PDCD2LQ9BRP1 358 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 ADNPQ9H2P0 1102 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 MRGBPQ9NV56 204 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 NMRK1Q9NWW6 199 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 STIP1P31948 543 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 KCNJ1P48048 391 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 GRIK4Q16099 956 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 SYTL5Q8TDW5 730 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 DBR1Q9UK59 544 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 PNMA8BQ9ULN7 279 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 DSG3P32926 999 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 SOX11P35716 441 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 CENPAP49450 140 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 GRB10Q13322 594 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 RASGRP2Q7LDG7 609 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 SOCS4Q8WXH5 440 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 KLF6Q99612 283 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 ANKRD65E5RJM6 399 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 POMCP01189 267 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 PBLDP30039 288 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 NCKAP1LP55160 1127 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 CENPPQ6IPU0 288 aa15.57■□□□□ 0.08
UBE3B-202ENST00000342494 ELOA2Q8IYF1 753 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 SPATS2LQ9NUQ6 558 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 THG1LQ9NWX6 298 aaKnown RBP15.57■□□□□ 0.08
UBE3B-202ENST00000342494 AKAP10O43572 662 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 SEC24DO94855 1032 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-202ENST00000342494 INSRRP14616 1297 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 ITGALP20701 1170 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 NUMBP49757 651 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 SKOR1P84550 965 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 C16orf87Q6PH81 154 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 DENND5BQ6ZUT9 1274 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 CLEC4FQ8N1N0 589 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 SGF29Q96ES7 293 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 HMX1Q9NP08 348 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-202ENST00000342494 VPS26AO75436 327 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 DARSP14868 501 aaKnown RBP15.56■□□□□ 0.08
UBE3B-202ENST00000342494 GRIN1Q05586 938 aa15.56■□□□□ 0.08
UBE3B-202ENST00000342494 FAXCQ5TGI0 409 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms