RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
TUBD1-202ENST00000340993 ZNF334Q9HCZ1 680 aaPredicted RBP14.03□□□□□ -0.16
TUBD1-202ENST00000340993 DENND4AQ7Z401 1863 aa14.03□□□□□ -0.16
TUBD1-202ENST00000340993 CLUHO75153 1309 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 TTC28Q96AY4 2481 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 PIK3R2O00459 728 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 SLC34A2O95436 690 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 ANXA13P27216 316 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 CCR2P41597 374 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.16
TUBD1-202ENST00000340993 MFAP3P55082 362 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 POLR2FP61218 127 aaKnown RBP14.02□□□□□ -0.16
TUBD1-202ENST00000340993 YWHAEP62258 255 aaKnown RBP14.02□□□□□ -0.16
TUBD1-202ENST00000340993 FANCCQ00597 558 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 MAPRE1Q15691 268 aaKnown RBP14.02□□□□□ -0.16
TUBD1-202ENST00000340993 UVSSAQ2YD98 709 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 PAQR9Q6ZVX9 377 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 UNC93AQ86WB7 457 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 UBA3Q8TBC4 463 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 ATXN2LQ8WWM7 1075 aaKnown RBP14.02□□□□□ -0.16
TUBD1-202ENST00000340993 ASAH2Q9NR71 780 aa14.02□□□□□ -0.16
TUBD1-202ENST00000340993 A0A1W2PRU2 124 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 HNRNPA1P09651 372 aaKnown RBP eCLIP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 CEBPBP17676 345 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 FSHRP23945 695 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 CYP4F8P98187 520 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 GCNT1Q02742 428 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 STXBP5Q5T5C0 1151 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 KLHDC7AQ5VTJ3 777 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 DNAJB7Q7Z6W7 309 aaPredicted RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 UBR7Q8N806 425 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 HDAC7Q8WUI4 952 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 TFAP2BQ92481 460 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SUSD6Q92537 303 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SLITRK6Q9H5Y7 841 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 IFNKQ9P0W0 207 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 OBSL1O75147 1896 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SLC38A8A6NNN8 435 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 CYP26A1O43174 497 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 ABL1P00519 1130 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 FAM200BP0CF97 657 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 BMP1P13497 986 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 MTHFRP42898 656 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 ZNF445P59923 1031 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 USP46P62068 366 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 DRAP1Q14919 205 aaPredicted RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 CFAP221Q4G0U5 840 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 FILIP1LQ4L180 1135 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 GAS2L3Q86XJ1 694 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 CRYBG2Q8N1P7 616 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SCAMP5Q8TAC9 235 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 C2orf15Q8WU43 125 aaKnown RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SMARCD1Q96GM5 515 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 SMOQ99835 787 aa14.01□□□□□ -0.17
TUBD1-202ENST00000340993 MRPS23Q9Y3D9 190 aaKnown RBP14.01□□□□□ -0.17
TUBD1-202ENST00000340993 ATP8B3O60423 1300 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 C2CD4DB7Z1M9 353 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 TULP2O00295 520 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 FOXN3O00409 490 aaPredicted RBP14□□□□□ -0.17
TUBD1-202ENST00000340993 NOL4O94818 638 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 UCHL3P15374 230 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 PTPN2P17706 415 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 GABRR2P28476 465 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 UBASH3AP57075 661 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 ARID5AQ03989 594 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 SMARCB1Q12824 385 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 TEAD2Q15562 447 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 SGO2Q562F6 1265 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 DPY19L2P1Q6NXN4 242 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 GPRIN1Q7Z2K8 1008 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 PASD1Q8IV76 773 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 CMASQ8NFW8 434 aaPredicted RBP14□□□□□ -0.17
TUBD1-202ENST00000340993 NEK11Q8NG66 645 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 ADAMTS19Q8TE59 1207 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 MCRS1Q96EZ8 462 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 MYADMQ96S97 322 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 ZSWIM1Q9BR11 485 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 RBSNQ9H1K0 784 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 GANQ9H2C0 597 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 WDR6Q9NNW5 1121 aaKnown RBP14□□□□□ -0.17
TUBD1-202ENST00000340993 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
TUBD1-202ENST00000340993 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 SIK3Q9Y2K2 1263 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
TUBD1-202ENST00000340993 BDP1A6H8Y1 2624 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 M0QYV0 167 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 THAP12O43422 761 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 CFHP08603 1231 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 GNA15P30679 374 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 HOXA9P31269 272 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 RGS7P49802 495 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 RPL10AP62906 217 aaKnown RBP13.99□□□□□ -0.17
TUBD1-202ENST00000340993 TJAP1Q5JTD0 557 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 CYP4A22Q5TCH4 519 aa13.99□□□□□ -0.17
TUBD1-202ENST00000340993 TAF3Q5VWG9 929 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms