RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 STMN2Q93045 179 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 FAF2Q96CS3 445 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 CGRRF1Q99675 332 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
CPSF7-201ENST00000340437 DKC1O60832 514 aaKnown RBP eCLIP15.08■□□□□ 0
CPSF7-201ENST00000340437 TPBGLP0DKB5 382 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 MYL2P10916 166 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 HADHQ16836 314 aaKnown RBP15.08■□□□□ 0
CPSF7-201ENST00000340437 CCDC62Q6P9F0 684 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 RNF149Q8NC42 400 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 RILPQ96NA2 401 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 SLX4Q8IY92 1834 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 ATP5HO75947 161 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 ACVR2BQ13705 512 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 SLFN12LQ6IEE8 588 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 TTLL6Q8N841 843 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 MYOZ2Q9NPC6 264 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PIH1D1Q9NWS0 290 aaKnown RBP15.07■□□□□ 0
CPSF7-201ENST00000340437 PPARGC1AQ9UBK2 798 aaKnown RBP15.07■□□□□ 0
CPSF7-201ENST00000340437 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
CPSF7-201ENST00000340437 KBTBD13C9JR72 458 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 ABHD2P08910 425 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PTPN4P29074 926 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 CDH6P55285 790 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 IGBP1P78318 339 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PTPN20Q4JDL3 420 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 ALYREFQ86V81 257 aaKnown RBP15.07■□□□□ 0
CPSF7-201ENST00000340437 DNAJC9Q8WXX5 260 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 LPAR1Q92633 364 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 SERAC1Q96JX3 654 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 SHCBP1LQ9BZQ2 653 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 C17orf75Q9HAS0 396 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PCDH9Q9HC56 1237 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 EURLQ9NYK6 297 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 MCF2LO15068 1137 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PRPF4O43172 522 aaKnown RBP eCLIP15.07■□□□□ 09e-7■■■■■ 34.9
CPSF7-201ENST00000340437 TYROBPO43914 113 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 PLA2G6O60733 806 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 ATP4AP20648 1035 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 TSNAXIP1Q2TAA8 658 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 KIAA0319LQ8IZA0 1049 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 WDTC1Q8N5D0 677 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 SLC25A41Q8N5S1 370 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 NETO2Q8NC67 525 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 TRAPPC12Q8WVT3 735 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 FAM161BQ96MY7 647 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 WRNIP1Q96S55 665 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 MIPEPQ99797 713 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 CADM1Q9BY67 442 aaKnown RBP15.07■□□□□ 0
CPSF7-201ENST00000340437 RAB6BQ9NRW1 208 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 SYNPO2Q9UMS6 1093 aa15.07■□□□□ 0
CPSF7-201ENST00000340437 RNF8O76064 485 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 SUPT20HL2P0C7V6 817 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 PIGHQ14442 188 aaPredicted RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 OASLQ15646 514 aaKnown RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 SUPT20HL1Q3ZLR7 823 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 TMEM154Q6P9G4 183 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ARMC2Q8NEN0 867 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 DLGAP2Q9P1A6 1054 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 UBR3Q6ZT12 1888 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 TRIM49D1C9J1S8 452 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 CAPN9O14815 690 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 STBD1O95210 358 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 OATP04181 439 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 RGS7P49802 495 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 TMPRSS15P98073 1019 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 PPP6R3Q5H9R7 873 aaPredicted RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 ABHD15Q6UXT9 468 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ZCCHC23Q6ZST2 131 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 PPP1R14CQ8TAE6 165 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 GPRASP2Q96D09 838 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ACAP3Q96P50 834 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 BATF3Q9NR55 127 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 PICK1Q9NRD5 415 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 SENP1Q9P0U3 644 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ZNRF3Q9ULT6 936 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 DPPA5A6NC42 116 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 H3BRJ5 948 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 CYB561D2O14569 222 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 SMIM24O75264 130 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 LRCH4O75427 683 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ZWINTO95229 277 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 LDHAP00338 332 aaKnown RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 THOC5Q13769 683 aaKnown RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 FAM102AQ5T9C2 384 aaPredicted RBP15.06■□□□□ 0
CPSF7-201ENST00000340437 MAB21L3Q8N8X9 362 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 VCPIP1Q96JH7 1222 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 SHOC2Q9UQ13 582 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
CPSF7-201ENST00000340437 COPEO14579 308 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 ALDH18A1P54886 795 aaKnown RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 CAPSQ13938 189 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 DUOXA2Q1HG44 320 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 LRRC36Q1X8D7 754 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 C15orf59Q2T9L4 293 aaPredicted RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 THEMIS2Q5TEJ8 643 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 OR6B2Q6IFH4 312 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 RINLQ6ZS11 566 aa15.05■□□□□ 0
CPSF7-201ENST00000340437 PRPF39Q86UA1 669 aaKnown RBP15.05■□□□□ 0
CPSF7-201ENST00000340437 HIPK4Q8NE63 616 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms