RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ELOVL6Q9H5J4 265 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 R3HDM2Q9Y2K5 976 aaKnown RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 RTN2O75298 545 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 PSIP1O75475 530 aaKnown RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 SULT1E1P49888 294 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 MZT2BQ6NZ67 158 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 ZNF483Q8TF39 744 aaPredicted RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 KLHL32Q96NJ5 620 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 WDR24Q96S15 920 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 SEPHS2Q99611 448 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 NMRK1Q9NWW6 199 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 PCDHB9Q9Y5E1 797 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 NCF1BA6NI72 391 aaPredicted RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 NCF1CA8MVU1 366 aaPredicted RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 NCF1P14598 390 aaPredicted RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 AGBL2Q5U5Z8 902 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 C12orf4Q9NQ89 552 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 ENO2P09104 434 aaPredicted RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 GTF2E2P29084 291 aaKnown RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 MTMR1Q13613 665 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 OCLNQ16625 522 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
USP47-202ENST00000339865 GATAD2AQ86YP4 633 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 RCOR2Q8IZ40 523 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 EHD3Q9NZN3 535 aa13.29□□□□□ -0.28
USP47-202ENST00000339865 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 A8MXQ7 604 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ITGA1P56199 1179 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 STK4Q13043 487 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 HIST2H2ACQ16777 129 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 TCHHL1Q5QJ38 904 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 HIST2H2AA3Q6FI13 130 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 C1orf50Q9BV19 199 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 CCDC88CQ9P219 2028 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ZBTB7AO95365 584 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 FAM220BPB1ANY3 271 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 SLC16A4O15374 487 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 FAM58BPP0C7Q3 252 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 CPB1P15086 417 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 VAC14Q08AM6 782 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 CCDC185Q8N715 623 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 IPMKQ8NFU5 416 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 CCDC17Q96LX7 622 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 SNX12Q9UMY4 172 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 DUSP12Q9UNI6 340 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 PACS2Q86VP3 889 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 RBAKQ9NYW8 714 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 LIMA1Q9UHB6 759 aaKnown RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ADORA1P30542 326 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 SLC29A2Q14542 456 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 CPA5Q8WXQ8 436 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 CENPIQ92674 756 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 FAM118BQ9BPY3 351 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 IGF1RP08069 1367 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 FAM47E-STBD1D6RA91 191 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 MAPK9P45984 424 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ST8SIA6P61647 398 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 KCTD14Q9BQ13 255 aaPredicted RBP13.28□□□□□ -0.28
USP47-202ENST00000339865 TRPM5Q9NZQ8 1165 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 ZSWIM5Q9P217 1185 aa13.28□□□□□ -0.28
USP47-202ENST00000339865 PSMD11O00231 422 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 AP3D1O14617 1153 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 PHKA2P46019 1235 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 RAD23AP54725 363 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 VEPH1Q14D04 833 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 DUOXA2Q1HG44 320 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 RGS21Q2M5E4 152 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 SVOPQ8N4V2 548 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 MRPS7Q9Y2R9 242 aaKnown RBP13.27□□□□□ -0.28
USP47-202ENST00000339865 KANSL1LA0AUZ9 987 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 SUPT7LO94864 414 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.28
USP47-202ENST00000339865 ATN1P54259 1190 aaPredicted RBP13.27□□□□□ -0.28
USP47-202ENST00000339865 SMTNL2Q2TAL5 461 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.28
USP47-202ENST00000339865 CASP12Q6UXS9 341 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 CD209Q9NNX6 404 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 COMMD8Q9NX08 183 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 EMSYQ7Z589 1322 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 MGAT4DA6NG13 374 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 TNFAIP8O95379 198 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 IRF1P10914 325 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 MAGEA2P43356 314 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms