RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PPP1R15BQ5SWA1 713 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 ATF7IP2Q5U623 682 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 ZCCHC9Q8N567 271 aaKnown RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 TMEM121Q9BTD3 319 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 NSRP1Q9H0G5 558 aaKnown RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 KDM4CQ9H3R0 1056 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 CYTH4Q9UIA0 394 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 Q9Y3F1 56 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 CEP83Q9Y592 693 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 C22orf31O95567 290 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 TNNC2P02585 160 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 HOXD10P28358 340 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 CPT1AP50416 773 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 LMNB2Q03252 620 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 ZKSCAN8Q15776 578 aaPredicted RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 PTPN20Q4JDL3 420 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 LACTB2Q53H82 288 aaPredicted RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 TFDP3Q5H9I0 405 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 NUGGCQ68CJ6 796 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 EFCAB12Q6NXP0 572 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 MPZL3Q6UWV2 235 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 ALLCQ8N6M5 410 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 JOSD2Q8TAC2 188 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 MINDY3Q9H8M7 445 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 HTTP42858 3142 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 SGK1O00141 431 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 PECAM1P16284 738 aaPredicted RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 PSMA2P25787 234 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 PIGHQ14442 188 aaPredicted RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 ICE2Q659A1 982 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 MRRFQ96E11 262 aaKnown RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 CASP8AP2Q9UKL3 1982 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 CDH16O75309 829 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 DUSP11O75319 330 aaKnown RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 MYL3P08590 195 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 PRKAR2AP13861 404 aaKnown RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 CDKN2BP42772 138 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 MNAT1P51948 309 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 ITIH4Q14624 930 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 FSCN1Q16658 493 aaKnown RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 TAB3Q8N5C8 712 aaPredicted RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 EMC1Q8N766 993 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
LITAF-201ENST00000339430 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 KLC4Q9NSK0 619 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 ABCF3Q9NUQ8 709 aa17.15■□□□□ 0.34
LITAF-201ENST00000339430 POC1B-GALNT4F8VUJ3 575 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 BANF1O75531 89 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 TCEA3O75764 348 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 RASSF9O75901 435 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 F2P00734 622 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 IQCF3P0C7M6 154 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 STAT4Q14765 748 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 SURF1Q15526 300 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 WDR72Q3MJ13 1102 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 FAM133BQ5BKY9 247 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 TSHZ1Q6ZSZ6 1077 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 ADAM33Q9BZ11 813 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 C2orf40Q9H1Z8 148 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 TPX2Q9ULW0 747 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 EXOC1LA0A1B0GW35 172 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 ACKR2O00590 384 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 SNX3O60493 162 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 NFICP08651 508 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 KRT3P12035 628 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 PROZP22891 400 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 OASLQ15646 514 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 GRIK4Q16099 956 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 LRRC38Q5VT99 294 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 SUGP1Q8IWZ8 645 aaKnown RBP17.14■□□□□ 0.33
LITAF-201ENST00000339430 CDT1Q9H211 546 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 PTPRHQ9HD43 1115 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 LGALS13Q9UHV8 139 aa17.14■□□□□ 0.33
LITAF-201ENST00000339430 RASA4BC9J798 803 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 SEPT4O43236 478 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 RASA4O43374 803 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 FKTNO75072 461 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 SPAG7O75391 227 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 IL1R2P27930 398 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 STX2P32856 288 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 CDH5P33151 784 aaPredicted RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 PSMC1P62191 440 aaKnown RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 TRPM8Q7Z2W7 1104 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 KIAA0319LQ8IZA0 1049 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 ARFGAP1Q8N6T3 406 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms