RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 C1orf127Q8N9H9 656 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 CNOT6LQ96LI5 555 aaKnown RBP12.33□□□□□ -0.44
CSMD2-202ENST00000338325 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 PPP4R2Q9NY27 417 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 FAM208BQ5VWN6 2430 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 C2orf78A6NCI8 922 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 BMP15O95972 392 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CSRP1P21291 193 aaKnown RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 BCKDHBP21953 392 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 GJB2P29033 226 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 PCSK1P29120 753 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 LHX1P48742 406 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 PDE6CP51160 858 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 SEC13P55735 322 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 GRIN1Q05586 938 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CCDC142Q17RM4 750 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 SCN4BQ8IWT1 228 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ADGRF2Q8IZF7 708 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 LINC00597Q9H2U6 94 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 GDAP2Q9NXN4 497 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ZMIZ1Q9ULJ6 1067 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 MMP17Q9ULZ9 603 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 EXOC7Q9UPT5 735 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 WASF3Q9UPY6 502 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CEP192Q8TEP8 1941 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 PATE3B3GLJ2 98 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 K7EQS6 105 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CEACAM1P13688 526 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 HDCP19113 662 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 DDIT3P35638 169 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 OPRD1P41143 372 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 MAGEA11P43364 429 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 C2orf27AQ580R0 203 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 L1TD1Q5T7N2 865 aaKnown RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 DYMQ7RTS9 669 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ZSWIM2Q8NEG5 633 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 CXorf38Q8TB03 319 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ACCSQ96QU6 501 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 STRA6Q9BX79 667 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 MRPL44Q9H9J2 332 aaKnown RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-202ENST00000338325 SEL1LQ9UBV2 794 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
CSMD2-202ENST00000338325 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 GABRDO14764 452 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 HCRTO43612 131 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
CSMD2-202ENST00000338325 KRT19P08727 400 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 PFKLP17858 780 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 SPINK2P20155 84 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 KCNA1Q09470 495 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 GAB4Q2WGN9 574 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
CSMD2-202ENST00000338325 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
CSMD2-202ENST00000338325 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
CSMD2-202ENST00000338325 MYOFQ9NZM1 2061 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 LEFTY2O00292 366 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 CYP17A1P05093 508 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 GAP43P17677 238 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 GARTP22102 1010 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 IRX4P78413 519 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 MRPS21P82921 87 aaKnown RBP12.3□□□□□ -0.44
CSMD2-202ENST00000338325 RBP5P82980 135 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 CRY1Q16526 586 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 SOWAHAQ2M3V2 549 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 CCDC33Q8N5R6 958 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 PIGKQ92643 395 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 SPACA7Q96KW9 195 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 CEP295NLQ96MC4 621 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 MAGEC2Q9UBF1 373 aaPredicted RBP12.3□□□□□ -0.44
CSMD2-202ENST00000338325 STK17AQ9UEE5 414 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms