RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NAB2Q15742 525 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 ST6GALNAC4Q9H4F1 302 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 PCDHB12Q9Y5F1 795 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 RNF225M0QZC1 329 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 CLTBP09497 229 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 GNL1P36915 607 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 TRIM60Q495X7 471 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 DNAJC24Q6P3W2 148 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 RBBP8NLQ8NC74 664 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 NUDCD1Q96RS6 583 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 ADAM22Q9P0K1 906 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 COMMD10Q9Y6G5 202 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 CCT8L1PA6NM43 557 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 CYB561D2O14569 222 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 ODC1P11926 461 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 MAPK7Q13164 816 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 AMHR2Q16671 573 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 SLC24A5Q71RS6 500 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 GSDMBQ8TAX9 411 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 RFFLQ8WZ73 363 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 MAML1Q92585 1016 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 TMEM117Q9H0C3 514 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 NOD2Q9HC29 1040 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 A0A0B4J269 797 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TULP2O00295 520 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TNFSF9P41273 254 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 SLC35C1Q96A29 364 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 GYG2O15488 501 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TSPAN1O60635 241 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 POU5F1BQ06416 359 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TARBP2Q15633 366 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 RNF139Q8WU17 664 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 MRPL47Q9HD33 250 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 CNOT8Q9UFF9 292 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 ITGA11Q9UKX5 1188 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 IGKV6D-21A0A0A0MT36 114 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 FGBP02675 491 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 GRM5P41594 1212 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 GPC5P78333 572 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 ELAVL2Q12926 359 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.433e-7■■■□□ 16.1
HDAC6-201ENST00000334136 MAP7Q14244 749 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 SPARCL1Q14515 664 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 GJB7Q6PEY0 223 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 LONP2Q86WA8 852 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 HELQQ8TDG4 1101 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 C9orf72Q96LT7 481 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 GCNAQ96QF7 691 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 PLEKHA5Q9HAU0 1116 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 CUL2Q13617 745 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
HDAC6-201ENST00000334136 NOMO2Q5JPE7 1267 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 FGD4Q96M96 766 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 FAM49BQ9NUQ9 324 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 IPPQ9Y573 584 aa12.37□□□□□ -0.43
HDAC6-201ENST00000334136 CNTNAP2Q9UHC6 1331 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 EFCAB14O75071 495 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 MT-ND3P03897 115 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 ADRB2P07550 413 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 PON1P27169 355 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 MTM1Q13496 603 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 VEPH1Q14D04 833 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 ELMOD1Q8N336 334 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms