RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 ICA1LQ8NDH6 482 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TMEM161BQ8NDZ6 487 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RXFP2Q8WXD0 754 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KCND2Q9NZV8 630 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KNL1Q8NG31 2342 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KCNK1O00180 336 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 WNT10BO00744 389 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GIPC1O14908 333 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CST3P01034 146 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TPH1P17752 444 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GNL1P36915 607 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RFC5P40937 340 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GTF2A2P52657 109 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MRPS9P82933 396 aaKnown RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PLIN5Q00G26 463 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PRPSAP1Q14558 356 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TCHHL1Q5QJ38 904 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SHC3Q92529 594 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FGD4Q96M96 766 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KRT36O76013 467 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZWINTO95229 277 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RANBP1P43487 201 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MMP13P45452 471 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NME5P56597 212 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SNX16P57768 344 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SLC20A2Q08357 652 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RASA2Q15283 850 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 JADE1Q6IE81 842 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZDHHC24Q6UX98 284 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 BTNL9Q6UXG8 535 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 OR6P1Q8NGX9 317 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CKAP2Q8WWK9 683 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SEPT1Q8WYJ6 367 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 COPS5Q92905 334 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MKL1Q969V6 931 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HPDLQ96IR7 371 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SUDS3Q9H7L9 328 aaPredicted RBP10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PIM2Q9P1W9 311 aa10.24□□□□□ -0.77
CSGALNACT1-201ENST00000332246 P4HA2O15460 535 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CCNE2O96020 404 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 OATP04181 439 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SNRPAP09012 282 aaKnown RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SNHG28P0DPA3 235 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SERPINB5P36952 375 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GAD2Q05329 585 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HIC1Q14526 733 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PCSK7Q16549 785 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NFIL3Q16649 462 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SNX30Q5VWJ9 437 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KRT80Q6KB66 452 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DENND1BQ6P3S1 775 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 IYDQ6PHW0 289 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SCN4BQ8IWT1 228 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DAW1Q8N136 415 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MSL3Q8N5Y2 521 aaKnown RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZNF669Q96BR6 464 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CLPTM1LQ96KA5 538 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANKEF1Q9NU02 776 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GRHL1Q9NZI5 618 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 HES2Q9Y543 173 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DNALI1O14645 258 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TAF12Q16514 161 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KIZQ2M2Z5 673 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TXNRD3NBQ6F5E7 133 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TRIM42Q8IWZ5 723 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TRIML2Q8N7C3 387 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GMCL1P1Q8NEA9 526 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PDZD8Q8NEN9 1154 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ASAP3Q8TDY4 903 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 LENG9Q96B70 501 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DDX56Q9NY93 547 aaKnown RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 USP18Q9UMW8 372 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAF1Q9UNN5 650 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GON4LQ3T8J9 2241 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ASTN2O75129 1339 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FCHO1O14526 889 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GNAT1P11488 350 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 EEF1B2P24534 225 aaKnown RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 AP2B1P63010 937 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CENPCQ03188 943 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TAF5Q15542 800 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PREPLQ4J6C6 727 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ECHDC2Q86YB7 292 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 C4orf19Q8IY42 314 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 JOSD2Q8TAC2 188 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TRPV6Q9H1D0 765 aa10.23□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SUPT3HO75486 399 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms