RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 TCF15Q12870 199 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 CMASQ8NFW8 434 aaPredicted RBP16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 ZNF707Q96C28 371 aaPredicted RBP16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 RIPOR3Q96MK2 946 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 NT5C1AQ9BXI3 368 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 ABI2Q9NYB9 513 aaPredicted RBP16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 DNAJC12Q9UKB3 198 aa16.3■□□□□ 0.2
KLHDC3-203ENST00000332245 ZMYND10O75800 440 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 POU2F2P09086 479 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 CCDC130P13994 396 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 UCHL3P15374 230 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 GPR15P49685 360 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 YWHAEP62258 255 aaKnown RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 TPM4P67936 248 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ATAT1Q5SQI0 421 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 CCDC149Q6ZUS6 474 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 FUKQ8N0W3 1084 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 SPPL2BQ8TCT7 592 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 TNIP3Q96KP6 325 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 DNAI2Q9GZS0 605 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ACP6Q9NPH0 428 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 FAM207AQ9NSI2 230 aaPredicted RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 FAM49BQ9NUQ9 324 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ZDHHC7Q9NXF8 308 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 USTQ9Y2C2 406 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 PCDHB5Q9Y5E4 795 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 NOTCH4Q99466 2003 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 CCDC195A0A1B0GUA6 201 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 FOXN3O00409 490 aaPredicted RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 HNRNPA1P09651 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 HAPLN1P10915 354 aaPredicted RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ATF6P18850 670 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 BDNFP23560 247 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ELF1P32519 619 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 UBASH3AP57075 661 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 CYP27A1Q02318 531 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 CFAP221Q4G0U5 840 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 RARS2Q5T160 578 aaKnown RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 TFAP2BQ92481 460 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 SHC3Q92529 594 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 ZNF518BQ9C0D4 1074 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 XPO4Q9C0E2 1151 aaKnown RBP16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 SFXN1Q9H9B4 322 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 SORCS3Q9UPU3 1222 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 YIPF1Q9Y548 306 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 INSL5Q9Y5Q6 135 aa16.29■□□□□ 0.2
KLHDC3-203ENST00000332245 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 NRG2O14511 850 aaPredicted RBP16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 PRRG1O14668 218 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 CCL16O15467 120 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 BEST1O76090 585 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 MFAP3P55082 362 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 TWF1Q12792 350 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 MTMR3Q13615 1198 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 PPP1R26Q5T8A7 1209 aaPredicted RBP16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 LIN9Q5TKA1 542 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 STKLD1Q8NE28 680 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 SLC2A14Q8TDB8 520 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 GPR152Q8TDT2 470 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 CEP72Q9P209 647 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 DAAM1Q9Y4D1 1078 aa16.28■□□□□ 0.2
KLHDC3-203ENST00000332245 C2CD4DB7Z1M9 353 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 TRIM21P19474 475 aaKnown RBP16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 TUFMP49411 452 aaKnown RBP16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 JAM2P57087 298 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 POLR2FP61218 127 aaKnown RBP16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 DRAP1Q14919 205 aaPredicted RBP16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 DDR2Q16832 855 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 MGAT5BQ3V5L5 792 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 PPM1LQ5SGD2 360 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 C4orf50Q6ZRC1 276 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 FAM35AQ86V20 835 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 CYFIP2Q96F07 1278 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 PHOX2BQ99453 314 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 SEPT5Q99719 369 aaPredicted RBP16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 PRKD2Q9BZL6 878 aa16.27■□□□□ 0.19
KLHDC3-203ENST00000332245 HCFC1R1Q9NWW0 138 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms