RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TCEA3O75764 348 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 VDRP11473 427 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 MYO1EQ12965 1108 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 RNASEH2BQ5TBB1 312 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 DPP9Q86TI2 863 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 TAB3Q8N5C8 712 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 GTF3C2Q8WUA4 911 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 BRI3BPQ8WY22 251 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 MCRS1Q96EZ8 462 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 FAXDC2Q96IV6 333 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 ADPGKQ9BRR6 497 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 HMGCRP04035 888 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 VIMP08670 466 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 ATP5DP30049 168 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 GABRB2P47870 512 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 GSCP56915 257 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 RBP5P82980 135 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 MPP2Q14168 576 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 SRRM1Q8IYB3 904 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 KCTD6Q8NC69 237 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 DYDC1Q8WWB3 177 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 KAT2BQ92831 832 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 OSBPL7Q9BZF2 842 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 PCDH9Q9HC56 1237 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 RNF19AQ9NV58 838 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 SETD4Q9NVD3 440 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 ITGA11Q9UKX5 1188 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 C2CD2Q9Y426 696 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 CAPN7Q9Y6W3 813 aa15.61■□□□□ 0.09
CLCNKA-201ENST00000331433 ADCY6O43306 1168 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CDH16O75309 829 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 BANF1O75531 89 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 GRAP2O75791 330 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 MMP3P08254 477 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 BRAFP15056 766 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 GAD2Q05329 585 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 INCA1Q0VD86 236 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 TRNP1Q6NT89 227 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CCDC121Q6ZUS5 278 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 BBS12Q6ZW61 710 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 GPR142Q7Z601 462 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 FAM49AQ9H0Q0 323 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CCDC134Q9H6E4 229 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 TSPAN16Q9UKR8 245 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 E5RJQ4 531 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 PPEF2O14830 753 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 NPTXRO95502 500 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CPP00450 1065 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 STAT4Q14765 748 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 MORF4L2Q15014 288 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 RFX6Q8HWS3 928 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 ZBED8Q8IZ13 594 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 OR6J1Q8NGC5 347 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 PEBP4Q96S96 227 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CALN1Q9BXU9 219 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 FOXP3Q9BZS1 431 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 LGALS13Q9UHV8 139 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 USP18Q9UMW8 372 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
CLCNKA-201ENST00000331433 EXOC1LA0A1B0GW35 172 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 STRNO43815 780 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 RNF8O76064 485 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 TRUB2O95900 331 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 RGS7P49802 495 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 TMED2Q15363 201 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 C15orf59Q2T9L4 293 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 DUSP28Q4G0W2 176 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 OR6B2Q6IFH4 312 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 FAM183BPQ6ZVS7 135 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 GDAP1Q8TB36 358 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 PRCCQ92733 491 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 MAML3Q96JK9 1138 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 ZMAT2Q96NC0 199 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 CCDC77Q9BR77 488 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 NT5C1AQ9BXI3 368 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 HES2Q9Y543 173 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 PFKMP08237 780 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 ABHD2P08910 425 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 GCAP28676 217 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 NRLP54845 237 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 MMRN1Q13201 1228 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 MTM1Q13496 603 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 TAZQ16635 292 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 KYAT1Q16773 422 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 CDO1Q16878 200 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 FAM182AQ5T1J6 154 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 ANKRD22Q5VYY1 191 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 FBXW10Q5XX13 1052 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 CFAP57Q96MR6 1250 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 ELAC2Q9BQ52 826 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 EURLQ9NYK6 297 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 EFR3BQ9Y2G0 817 aa15.59■□□□□ 0.09
CLCNKA-201ENST00000331433 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 FSBPO95073 299 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 GRM5P41594 1212 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms