RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 PDK2Q15119 407 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 ZNF606Q8WXB4 792 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 NAF1Q96HR8 494 aaKnown RBP9.21□□□□□ -0.93
CPNE8-201ENST00000331366 CCDC106Q9BWC9 280 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 MAK16Q9BXY0 300 aaKnown RBP9.21□□□□□ -0.93
CPNE8-201ENST00000331366 SDCBP2Q9H190 292 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 C2orf40Q9H1Z8 148 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 TDRD3Q9H7E2 651 aaKnown RBP9.21□□□□□ -0.93
CPNE8-201ENST00000331366 TMOD2Q9NZR1 351 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 PPP1R1BQ9UD71 204 aaPredicted RBP9.21□□□□□ -0.93
CPNE8-201ENST00000331366 LRCH1Q9Y2L9 728 aa9.21□□□□□ -0.93
CPNE8-201ENST00000331366 H0YIN7 160 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CCNT2O60583 730 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CFBP00751 764 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 MARK3P27448 753 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ADSLP30566 484 aaPredicted RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 STX2P32856 288 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 RNASE9P60153 205 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 SLC1A5Q15758 541 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 DOK7Q18PE1 504 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 HSF5Q4G112 596 aaPredicted RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 SLC30A10Q6XR72 485 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 MARK2Q7KZI7 788 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 EMID1Q96A84 441 aaPredicted RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 LRRC37BQ96QE4 947 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 POP1Q99575 1024 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 MIS12Q9H081 205 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 USP29Q9HBJ7 922 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 PLK2Q9NYY3 685 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 DNPEPQ9ULA0 475 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 NUMBLQ9Y6R0 609 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CITO14578 2027 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ZBTB42B2RXF5 422 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 RASA4BC9J798 803 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 RASA4O43374 803 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ATP9AO75110 1047 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 GCATO75600 419 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 HMGCRP04035 888 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 LINGO3P0C6S8 592 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 KDELR1P24390 212 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ACAT1P24752 427 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 GNA15P30679 374 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CRHR1P34998 444 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 SH3BGRP55822 239 aaPredicted RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 RPS6P62753 249 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ILF2Q12905 390 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 EMC2Q15006 297 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 RABGAP1LQ5R372 815 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 DAB2IPQ5VWQ8 1189 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CCNJLQ8IV13 435 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 NME8Q8N427 588 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 TMEM35BQ8NCS4 154 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 NSUN6Q8TEA1 469 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 C1orf54Q8WWF1 131 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 TAAR1Q96RJ0 339 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 SMC6Q96SB8 1091 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 ZNF341Q9BYN7 854 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 MOCS1Q9NZB8 636 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 AGO2Q9UKV8 859 aaKnown RBP9.21□□□□□ -0.94
CPNE8-201ENST00000331366 NUB1Q9Y5A7 615 aa9.21□□□□□ -0.94
CPNE8-201ENST00000331366 MED7O43513 233 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 SETDB1Q15047 1291 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 PCBP1Q15365 356 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ERICH1Q86X53 443 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 XYLT1Q86Y38 959 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 MFN1Q8IWA4 741 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 PPM1KQ8N3J5 372 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 BICD1Q96G01 975 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 PCYT2Q99447 389 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ZNF385DQ9H6B1 395 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 JPH1Q9HDC5 661 aaPredicted RBP9.2□□□□□ -0.94
CPNE8-201ENST00000331366 DNAJC28Q9NX36 388 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ZFATQ9P243 1243 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 PADI4Q9UM07 663 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 RBM47A0AV96 593 aaKnown RBP9.2□□□□□ -0.94
CPNE8-201ENST00000331366 KCNJ1P48048 391 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 SERPINB9P50453 376 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 NOP14P78316 857 aaKnown RBP9.2□□□□□ -0.94
CPNE8-201ENST00000331366 NIPAL4Q0D2K0 466 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ZNF365Q70YC5 407 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 AGBL1Q96MI9 1066 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ACO2Q99798 780 aaKnown RBP9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ZNF670Q9BS34 389 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ZHX3Q9H4I2 956 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 POPDC2Q9HBU9 364 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 ASIC3Q9UHC3 531 aa9.2□□□□□ -0.94
CPNE8-201ENST00000331366 CNOT11Q9UKZ1 510 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms