RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CCNFP41002 786 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 QARSP47897 775 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 NPTX2P47972 431 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PPM1FP49593 454 aaPredicted RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 GPC3P51654 580 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 LMNB2Q03252 620 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SPP2Q13103 211 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 LRRC23Q53EV4 343 aaPredicted RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 C6orf163Q5TEZ5 329 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 C15orf52Q6ZUT6 534 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 PRPF39Q86UA1 669 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 KATNAL2Q8IYT4 538 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 CSRNP1Q96S65 589 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 RANBP17Q9H2T7 1088 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 CYP4F11Q9HBI6 524 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PCSK1NQ9UHG2 260 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 EP400Q96L91 3159 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 CYB561D2O14569 222 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PSTPIP1O43586 416 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ECE2O60344 883 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ATG7O95352 703 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 INHBAP08476 426 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ANPEPP15144 967 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 DMP1Q13316 513 aaPredicted RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 BMPR2Q13873 1038 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 CNPY1Q3B7I2 92 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SPOCD1Q6ZMY3 1216 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 RGS9BPQ6ZS82 235 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 PPM1NQ8N819 430 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ATP11CQ8NB49 1132 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 NMD3Q96D46 503 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 TLE6Q9H808 572 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 KCNK13Q9HB14 408 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 HLA-DRAP01903 254 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 WNT7BP56706 349 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 OTUD4Q01804 1114 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 CYP24A1Q07973 514 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 UBAP2LQ14157 1087 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 MORF4L2Q15014 288 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 LPCAT4Q643R3 524 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 MON1BQ7L1V2 547 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SCUBE1Q8IWY4 988 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 FAM71DQ8N9W8 422 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SMC1BQ8NDV3 1235 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 ACTL9Q8TC94 416 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 EBF3Q9H4W6 596 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 MRPL47Q9HD33 250 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 KCND2Q9NZV8 630 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SLC24A2Q9UI40 661 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 XPO7Q9UIA9 1087 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 ANGPTL2Q9UKU9 493 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 SCAF8Q9UPN6 1271 aaKnown RBP8.25□□□□□ -1.09
VMA21-201ENST00000330374 NOD1Q9Y239 953 aa8.25□□□□□ -1.09
VMA21-201ENST00000330374 TCP10L2B9ZVM9 353 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 ABLIM1O14639 778 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 BBOX1O75936 387 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 SORBS2O94875 1100 aaKnown RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 VCPP55072 806 aaKnown RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 DSG1Q02413 1049 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 KBTBD12Q3ZCT8 623 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 FAXCQ5TGI0 409 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 RAPH1Q70E73 1250 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 RASSF3Q86WH2 238 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 IGDCC3Q8IVU1 814 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 FEZF2Q8TBJ5 459 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 GATA6Q92908 595 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 NDNQ99608 321 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 MTO1Q9Y2Z2 717 aaKnown RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 MYH9P35579 1960 aaKnown RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 I3L4J1 428 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 CST8O60676 142 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 PDE5AO76074 875 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 GSTA2P09210 222 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 SPATA31D3P0C874 917 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 OSBPP22059 807 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 AQP5P55064 265 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 GTF2BQ00403 316 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 EML3Q32P44 896 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 EFHC2Q5JST6 749 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 CEP128Q6ZU80 1094 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 SPATA31D4Q6ZUB0 917 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 LDHDQ86WU2 507 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 TDRPQ86YL5 185 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 ARHGAP24Q8N264 748 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 BANPQ8N9N5 519 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 SLC26A7Q8TE54 656 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 MTBPQ96DY7 904 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 FAM81BQ96LP2 452 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 PANX3Q96QZ0 392 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 SENP7Q9BQF6 1050 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 MXRA8Q9BRK3 442 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 ASCC2Q9H1I8 757 aaPredicted RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 AVENQ9NQS1 362 aaPredicted RBP8.24□□□□□ -1.09
VMA21-201ENST00000330374 PACSIN3Q9UKS6 424 aa8.24□□□□□ -1.09
VMA21-201ENST00000330374 EXOC7Q9UPT5 735 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms