RNA–Protein interactions for RNA: ENST00000328090.9

FAM208B-201, Transcript of family with sequence similarity 208 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM208B, Length 8,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-201ENST00000328090 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ATG16L2Q8NAA4 619 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 TMEM237Q96Q45 408 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 EFCAB1Q9HAE3 211 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ZNF624Q9P2J8 865 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 MPOP05164 745 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 LPIN1Q14693 890 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 KCNB1Q14721 858 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ZNF57Q68EA5 555 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 BNIPLQ7Z465 357 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 EPB41L4BQ9H329 900 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 TRIT1Q9H3H1 467 aaKnown RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 CROCCQ5TZA2 2017 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 CCNG1P51959 295 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 SLC44A2Q8IWA5 706 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 SEPT5Q99719 369 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 LRG1P02750 347 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 KLHL1Q9NR64 748 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 COMMD8Q9NX08 183 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 CHP2O43745 196 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 PDIA6Q15084 440 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 AKAP7Q9P0M2 348 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 TMEM114B3SHH9 223 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 CHN1P15882 459 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 POU1F1P28069 291 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ADORA1P30542 326 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ITGA9Q13797 1035 aa17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 SAE1Q9UBE0 346 aaPredicted RBP17.11■□□□□ 0.33
FAM208B-201ENST00000328090 S100A1P23297 94 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ARF5P84085 180 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 TFB1MQ8WVM0 346 aaKnown RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 SKA1Q96BD8 255 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ZBTB39O15060 712 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 GH2P01242 217 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 IPMKQ8NFU5 416 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 IFRD1O00458 451 aaPredicted RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 NEK5Q6P3R8 708 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ERP27Q96DN0 273 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ROPN1BQ9BZX4 212 aaPredicted RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ACAD9Q9H845 621 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ROPN1Q9HAT0 212 aaPredicted RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ZSWIM5Q9P217 1185 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 B2RBV5 119 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 ACADMP11310 421 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 OR6J1Q8NGC5 347 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 DLGAP2Q9P1A6 1054 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 GMEB1Q9Y692 573 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 CCDC166P0CW27 439 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 EID3Q8N140 333 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 BDH2Q9BUT1 245 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 UBE2OQ9C0C9 1292 aaKnown RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 STK39Q9UEW8 545 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 PTPN1P18031 435 aaKnown RBP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 WDR72Q3MJ13 1102 aa17.1■□□□□ 0.33
FAM208B-201ENST00000328090 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
FAM208B-201ENST00000328090 USP17L10C9JJH3 530 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 AP3D1O14617 1153 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 RPL19P84098 196 aaKnown RBP17.09■□□□□ 0.33
FAM208B-201ENST00000328090 RESTQ13127 1097 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 AGBL2Q5U5Z8 902 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 FRMD6Q96NE9 622 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 NFKBIZQ9BYH8 718 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 ATAD3AQ9NVI7 634 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 A0A1W2PRG6 482 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 IRF1P10914 325 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 WRNIP1Q96S55 665 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 AGPAT1Q99943 283 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 SOX11P35716 441 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 PGS1Q32NB8 556 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 CCDC157Q569K6 752 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 HLA-DQA1Q5Y7H0 255 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
FAM208B-201ENST00000328090 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 BCL10O95999 233 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 FDFT1P37268 417 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
FAM208B-201ENST00000328090 UBASH3BQ8TF42 649 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 PPP1R37O75864 691 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 CRKP46108 304 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 GLB1LQ6UWU2 654 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 LCA5LO95447 670 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 ZNF682O95780 498 aa17.09■□□□□ 0.33
FAM208B-201ENST00000328090 MRPS25P82663 173 aaKnown RBP17.09■□□□□ 0.33
FAM208B-201ENST00000328090 TRAF2Q12933 501 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms