RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 DNAJC6O75061 913 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 PTPN7P35236 360 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 RPL22P35268 128 aaKnown RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 PSMC4P43686 418 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 CPA2P48052 419 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF200P98182 395 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 ROR2Q01974 943 aaKnown RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 KRT72Q14CN4 511 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MTERF2Q49AM1 385 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 RNF220Q5VTB9 566 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 SLFN12LQ6IEE8 588 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 SMC1BQ8NDV3 1235 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 GBP5Q96PP8 586 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 PHACTR1Q9C0D0 580 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 ARMCX1Q9P291 453 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MYH9P35579 1960 aaKnown RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 A8MXQ7 604 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 K7ERI5 159 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 SMAPO00193 183 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 PSAPP07602 524 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ASNSP08243 561 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 KRT7P08729 469 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 RXRBP28702 533 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 GDF10P55107 478 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CLDN10P78369 228 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF252P-AS1Q0IIN9 211 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 AP1B1Q10567 949 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CHSY1Q86X52 802 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 NAT8LQ8N9F0 302 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 WDR60Q8WVS4 1066 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 SKA1Q96BD8 255 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 FAM136AQ96C01 138 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ARHGAP28Q9P2N2 729 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 PPARGC1AQ9UBK2 798 aaKnown RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF70Q9UC06 446 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 PTPRJQ12913 1337 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 C2orf71A6NGG8 1288 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 H3BRJ5 948 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF862O60290 1169 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 LSM8O95777 96 aaKnown RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 PYGBP11216 843 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CACNA2D1P54289 1103 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 WNT7BP56706 349 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 OGDHQ02218 1023 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CYP4A22Q5TCH4 519 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 TAS1R3Q7RTX0 852 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 RFX6Q8HWS3 928 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CEP120Q8N960 986 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 FGD4Q96M96 766 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 CGRRF1Q99675 332 aa15.29■□□□□ 0.04
SSBP3-201ENST00000326956 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
SSBP3-201ENST00000326956 MCF2LO15068 1137 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 ENO1P06733 434 aaKnown RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 RTP1P59025 263 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 KCNT1Q5JUK3 1230 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 CWF19L1Q69YN2 538 aaKnown RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 TRIM42Q8IWZ5 723 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 NRG4Q8WWG1 115 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 PRR11Q96HE9 360 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 ZBTB45Q96K62 511 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF184Q99676 751 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 DHRS4Q9BTZ2 278 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 CYP26B1Q9NR63 512 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 PXMP2Q9NR77 195 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 MMP10P09238 476 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 DLDP09622 509 aaKnown RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 ELK3P41970 407 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 SERPINB4P48594 390 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 EIF3EP60228 445 aaKnown RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 PRKCEQ02156 737 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 PRKD1Q15139 912 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-201ENST00000326956 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 FAM71DQ8N9W8 422 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
SSBP3-201ENST00000326956 FAM237BA0A1B0GVD1 139 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 RARBP10826 455 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 TSHRP16473 764 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 CCND2P30279 289 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.04
SSBP3-201ENST00000326956 TMPRSS15P98073 1019 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 TMPRSS6Q8IU80 811 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 KCTD6Q8NC69 237 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 OR5B17Q8NGF7 314 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 MZB1Q8WU39 189 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 NMUR2Q9GZQ4 415 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
SSBP3-201ENST00000326956 TCRBV7S3A2A0A539 114 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms