RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 ERP44Q9BS26 406 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 KRT82Q9NSB4 513 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 H3BQF6 201 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 FANCGO15287 622 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 ADCY6O43306 1168 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 KRT7P08729 469 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
LIN28A-202ENST00000326279 FMO1Q01740 532 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 GCNT1Q02742 428 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 KYNUQ16719 465 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
LIN28A-202ENST00000326279 FAM71AQ8IYT1 594 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 RYBPQ8N488 228 aaPredicted RBP13.8□□□□□ -0.2
LIN28A-202ENST00000326279 DNAAF3Q8N9W5 541 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 ERLEC1Q96DZ1 483 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 CFAP36Q96G28 342 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 SLC27A5Q9Y2P5 690 aa13.8□□□□□ -0.2
LIN28A-202ENST00000326279 SMIM35A0A1B0GVV1 85 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
LIN28A-202ENST00000326279 AMPD2Q01433 879 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 FAF2Q96CS3 445 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 ASB7Q9H672 318 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 HOMER3Q9NSC5 361 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 SLC45A1Q9Y2W3 748 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PHF2O75151 1096 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 IRX4P78413 519 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 SMPD4Q9NXE4 827 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 F8VP50 259 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PRLRP16471 622 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
LIN28A-202ENST00000326279 SLMAPQ14BN4 828 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 KYAT1Q16773 422 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 P3H1Q32P28 736 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PPP1R2P3Q6NXS1 205 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 DENND1BQ6P3S1 775 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PDIK1LQ8N165 341 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 GIPC2Q8TF65 315 aa13.79□□□□□ -0.2
LIN28A-202ENST00000326279 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIN28A-202ENST00000326279 PCSK1P29120 753 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 MAP2K2P36507 400 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 F2P00734 622 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 RPL7AP62424 266 aaKnown RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 IFT88Q13099 833 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 ALG3Q92685 438 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 SAE1Q9UBE0 346 aaPredicted RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 SLC1A1P43005 524 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 SULT1E1P49888 294 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 CLCNKBP51801 687 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 EIF3EP60228 445 aaKnown RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 TSNARE1Q96NA8 513 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 SIX2Q9NPC8 291 aa13.78□□□□□ -0.2
LIN28A-202ENST00000326279 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
LIN28A-202ENST00000326279 CNTNAP2Q9UHC6 1331 aa13.77□□□□□ -0.2
LIN28A-202ENST00000326279 TRIOBPQ9H2D6 2365 aa13.77□□□□□ -0.2
LIN28A-202ENST00000326279 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.2
LIN28A-202ENST00000326279 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.2
LIN28A-202ENST00000326279 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.2
LIN28A-202ENST00000326279 LONRF1Q17RB8 773 aa13.77□□□□□ -0.2
LIN28A-202ENST00000326279 TAS1R3Q7RTX0 852 aa13.77□□□□□ -0.2
LIN28A-202ENST00000326279 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.2
LIN28A-202ENST00000326279 IQCF3P0C7M6 154 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 EZRP15311 586 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 SLC29A2Q14542 456 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 SLC39A12Q504Y0 691 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 PRUNE1Q86TP1 453 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 ZNF677Q86XU0 584 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 USP33Q8TEY7 942 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 PDCD6IPQ8WUM4 868 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 APOBEC3GQ9HC16 384 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 FAM187AA6NFU0 413 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 E5RJQ4 531 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 INHBAP08476 426 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 RBP3P10745 1247 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms