RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 COPAP53621 1224 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 PDIA6Q15084 440 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 VPS72Q15906 364 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 ABTB1Q969K4 478 aaPredicted RBP13.1□□□□□ -0.31
FN1-201ENST00000323926 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
FN1-201ENST00000323926 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 C8orf4Q9NR00 106 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 ARHGAP23Q9P227 1491 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 SORBS3O60504 671 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 PDGFRAP16234 1089 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
FN1-201ENST00000323926 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
FN1-201ENST00000323926 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
FN1-201ENST00000323926 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 B4GALNT2Q8NHY0 566 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 PDGFCQ9NRA1 345 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
FN1-201ENST00000323926 O00370 1275 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 TAF6P49848 677 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 EMC2Q15006 297 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
FN1-201ENST00000323926 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 FAM162AQ96A26 154 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 ECSITQ9BQ95 431 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 PAPOLBQ9NRJ5 636 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 DCTN4Q9UJW0 460 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 DPYDQ12882 1025 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 CCDC153Q494R4 210 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 NUP98P52948 1817 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 C6orf10Q5SRN2 563 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 TRIM48Q8IWZ4 208 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 ISCUQ9H1K1 167 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 NEK6Q9HC98 313 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 CD274Q9NZQ7 290 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 EXOSC10Q01780 885 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 NFRKBQ6P4R8 1299 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 AADATQ8N5Z0 425 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 KNTC1P50748 2209 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 PNMA8CA0A1B0GUJ8 204 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 C21orf2O43822 256 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 VPS26AO75436 327 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 SRP72O76094 671 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 LRG1P02750 347 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 TALDO1P37837 337 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 SLC39A8Q9C0K1 460 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 PTK7Q13308 1070 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 MMGT1Q8N4V1 131 aa13.09□□□□□ -0.31
FN1-201ENST00000323926 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
FN1-201ENST00000323926 SDR42E2A6NKP2 422 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 TGM2P21980 687 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 MMRN1Q13201 1228 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 TMEM169Q96HH4 297 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 PRKD2Q9BZL6 878 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.08□□□□□ -0.31
FN1-201ENST00000323926 GTF3C4Q9UKN8 822 aa13.08□□□□□ -0.31
FN1-201ENST00000323926 RAD23BP54727 409 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 ULK2Q8IYT8 1036 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
FN1-201ENST00000323926 ICAM1P05362 532 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 PTGER2P43116 358 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 PPIL2Q13356 520 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 BARGINQ6ZT62 677 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 SIK2Q9H0K1 926 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 POLG2Q9UHN1 485 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 GLRA3O75311 464 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 GUCY1B2O75343 617 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 CDH18Q13634 790 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 MXRA8Q9BRK3 442 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 VCPKMTQ9H867 229 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 EFCAB1Q9HAE3 211 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 NCKIPSDQ9NZQ3 722 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 TMCC3Q9ULS5 477 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
FN1-201ENST00000323926 BNIP3LO60238 219 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 PDHBP11177 359 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 LCP1P13796 627 aa13.08□□□□□ -0.32
FN1-201ENST00000323926 AXLP30530 894 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms