RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CAPRIN2Q6IMN6 1127 aaKnown RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 GLIS1Q8NBF1 620 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 JOSD2Q8TAC2 188 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 PLEKHA5Q9HAU0 1116 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 PCDH9Q9HC56 1237 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 TJP2Q9UDY2 1190 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 KIAA1257Q9ULG3 409 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 TJP3O95049 919 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 MMP3P08254 477 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 ATF2P15336 505 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 CD58P19256 250 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 ADORA2AP29274 412 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 DUSP28Q4G0W2 176 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 ARCQ7LC44 396 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 THNSL1Q8IYQ7 743 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 MAML1Q92585 1016 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 TMEM176AQ96HP8 235 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 NDC80O14777 642 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 ADCY6O43306 1168 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 AP1G2O75843 785 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 MICAL2O94851 1124 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 VDRP11473 427 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 CETPP11597 493 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 RFC1P35251 1148 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 MAP1SQ66K74 1059 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 RTP4Q96DX8 246 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 FAM155BO75949 473 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 ARMC3Q5W041 872 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 ERICH1Q86X53 443 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.391e-7■■■□□ 17.3
NCL-201ENST00000322723 TSPAN18Q96SJ8 248 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 SHOC2Q9UQ13 582 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 UTRNP46939 3433 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 FRMPD3Q5JV73 1810 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 ZNF638Q14966 1978 aaKnown RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 A0A087WZ62 844 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 PHLDB2Q86SQ0 1253 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 TMEM130Q8N3G9 435 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 MGARPQ8TDB4 240 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 PRCCQ92733 491 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
NCL-201ENST00000322723 PTPRDP23468 1912 aa12.61□□□□□ -0.39
NCL-201ENST00000322723 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 RASGRF2O14827 1237 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 CHN1P15882 459 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 RAP1GAPP47736 663 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 FKBP1BP68106 108 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 TRPC3Q13507 836 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SNX1Q13596 522 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 ZNF667Q5HYK9 610 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 FAF2Q96CS3 445 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 NLRP4Q96MN2 994 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 GGT7Q9UJ14 662 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 HAS3O00219 553 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SMPD1P17405 629 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 KDELR1P24390 212 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 LACTBP83111 547 aaPredicted RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 TFAMQ00059 246 aaKnown RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 NLRC5Q86WI3 1866 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SNX27Q96L92 541 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 BARX2Q9UMQ3 279 aaPredicted RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 GNEQ9Y223 722 aaKnown RBP12.6□□□□□ -0.39
NCL-201ENST00000322723 ALOX15BO15296 676 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 CYP2C8P10632 490 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 NEFHP12036 1026 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 TSHRP16473 764 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SCNN1AP37088 669 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 SYT17Q9BSW7 474 aa12.6□□□□□ -0.39
NCL-201ENST00000322723 C2CD4BA6NLJ0 364 aa12.59□□□□□ -0.39
NCL-201ENST00000322723 GABBR2O75899 941 aa12.59□□□□□ -0.39
NCL-201ENST00000322723 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
NCL-201ENST00000322723 KRT1P04264 644 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms