RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 PSMG1O95456 288 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 NIPA1Q7RTP0 329 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 ALLCQ8N6M5 410 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 APOPT1Q96IL0 206 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 SLITRK1Q96PX8 696 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 CGRRF1Q99675 332 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 KRT36O76013 467 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 FOXN2P32314 431 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 ANKRD20A4Q4UJ75 823 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 RNF149Q8NC42 400 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 DHX35Q9H5Z1 703 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 LRRC4CQ9HCJ2 640 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 COMMD10Q9Y6G5 202 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 LOC100653049A0A140TA62 436 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 KRT34O76011 436 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 LSM8O95777 96 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 ARL1P40616 181 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 RANBP1P43487 201 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 SLC1A5Q15758 541 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 TBCCQ15814 346 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 PDCD2LQ9BRP1 358 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 C10orf88Q9H8K7 445 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 DRG1Q9Y295 367 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 A8MXQ7 604 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 ALOX15BO15296 676 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 BANF1O75531 89 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 CCNHP51946 323 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 SESN2P58004 480 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 THEMIS2Q5TEJ8 643 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 CIAPIN1Q6FI81 312 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 KRT80Q6KB66 452 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 EMC1Q8N766 993 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 SHCBP1LQ9BZQ2 653 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 GRID1Q9ULK0 1009 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
DNMT3A-202ENST00000321117 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 22
DNMT3A-202ENST00000321117 GRAP2O75791 330 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 PRKCBP05771 671 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 ACTR2P61160 394 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF184Q99676 751 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 MTMR12Q9C0I1 747 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CISHQ9NSE2 258 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 SAE1Q9UBE0 346 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 GOLGA8QA0A0J9YX86 632 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 GOLGA8OA6NCC3 632 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 KBTBD13C9JR72 458 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 GOLGA8NF8WBI6 632 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CAP2P40123 477 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 WDR4P57081 412 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 MTMR2Q13614 643 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 XRRA1Q6P2D8 792 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CLNKQ7Z7G1 428 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 TRIML2Q8N7C3 387 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 AGR3Q8TD06 166 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 ABTB1Q969K4 478 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 COPAP53621 1224 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 NOMO3P69849 1222 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 RARS2Q5T160 578 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 GABPB2Q8TAK5 448 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 CMTM5Q96DZ9 223 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 SRPK1Q96SB4 655 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 C2orf40Q9H1Z8 148 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 ACAD9Q9H845 621 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF212Q9UDV6 495 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 C2CD2Q9Y426 696 aa13.29□□□□□ -0.28
DNMT3A-202ENST00000321117 MAP3K6O95382 1288 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 GLRA2P23416 452 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 CNGA3Q16281 694 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 CEP70Q8NHQ1 597 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 DTNBP1Q96EV8 351 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 KCNK16Q96T55 309 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 SLIT2O94813 1529 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 CHRNA5P30532 468 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 MYL6P60660 151 aa13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
DNMT3A-202ENST00000321117 SLCO2A1Q92959 643 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms