RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SLX4Q8IY92 1834 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 KCNN4O15554 427 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 FESP07332 822 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 LYNP07948 512 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PAEPP09466 180 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RAG1P15918 1043 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 EEF1DP29692 281 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 EPHX2P34913 555 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ABCG1P45844 678 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 TMED10P49755 219 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RTP1P59025 263 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 NRF1Q16656 503 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RARS2Q5T160 578 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 NBPF12Q5TAG4 269 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 TLDC1Q6P9B6 456 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 MFSD7Q6UXD7 560 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 IFNEQ86WN2 208 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 HACE1Q8IYU2 909 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 GALNT15Q8N3T1 639 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 EMC1Q8N766 993 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ASAP3Q8TDY4 903 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 FAM149B1Q96BN6 582 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 TRIM11Q96F44 468 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 MTMR9Q96QG7 549 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 WRNIP1Q96S55 665 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 IWS1Q96ST2 819 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CADM1Q9BY67 442 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 DEFB129Q9H1M3 183 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 IL1RL2Q9HB29 575 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 C20orf96Q9NUD7 363 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 THEGQ9P2T0 379 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PI4KBQ9UBF8 816 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 DNAJC16Q9Y2G8 782 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 AGRPO00253 132 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 GSC2O15499 205 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 KCNA4P22459 653 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 TYK2P29597 1187 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PKNOX1P55347 436 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 HTRA3P83110 453 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PPIDQ08752 370 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 DNAL1Q4LDG9 190 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 SESTD1Q86VW0 696 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RNF135Q8IUD6 432 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 WDR60Q8WVS4 1066 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CDKL2Q92772 493 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 AGAP3Q96P47 875 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 TUBGCP5Q96RT8 1024 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 WDR11Q9BZH6 1224 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 KLHL4Q9C0H6 718 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CCDC90BQ9GZT6 254 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 KCTD10Q9H3F6 313 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ZDHHC18Q9NUE0 388 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RBAK-RBAKDNI3L0D1 243 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 EDF1O60869 148 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ANPEPP15144 967 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PMLP29590 882 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CCR3P51677 355 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MRPS22P82650 360 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ALCAMQ13740 583 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ANKRD20A4Q4UJ75 823 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 TMEM119Q4V9L6 283 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ARSHQ5FYA8 562 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MFSD4BQ5TF39 518 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ART4Q93070 314 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 FAM20AQ96MK3 541 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PCDHB18PQ96TA0 734 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 LRMDAQ9H2I8 198 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 DDX4Q9NQI0 724 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 OLFML3Q9NRN5 406 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 GTSE1Q9NYZ3 720 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 EPS15L1Q9UBC2 864 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF70Q9UC06 446 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ASTN1O14525 1302 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 DDTLA6NHG4 134 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 FAM86B1E9PN63 330 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 hCG_1984214I3L0E3 225 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CES2O00748 559 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CRCPO75575 148 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SRGAP2CP0DJJ0 459 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 VAV1P15498 845 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 COPAP53621 1224 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 FLOT2Q14254 428 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SLC5A9Q2M3M2 681 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 EFHC1Q5JVL4 640 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ARHGEF16Q5VV41 709 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 LRRC8BQ6P9F7 803 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 RINLQ6ZS11 566 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MARK2Q7KZI7 788 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SATL1Q86VE3 508 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF713Q8N859 430 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SPATA18Q8TC71 538 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ACTL9Q8TC94 416 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SGF29Q96ES7 293 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF341Q9BYN7 854 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms