RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TMEM120AQ9BXJ8 343 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 IMPG2Q9BZV3 1241 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 PORCNQ9H237 461 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 SAE1Q9UBE0 346 aaPredicted RBP20.01■□□□□ 0.79
RTN4-201ENST00000317610 SLC9A2Q9UBY0 812 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 AGTPBP1Q9UPW5 1226 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 CST8O60676 142 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 LPXNO60711 386 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 MT-ND3P03897 115 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 KRT7P08729 469 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 AP3M2P53677 418 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 ACTR2P61160 394 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 DGKZQ13574 1117 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 C11orf91Q3C1V1 193 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 ACSBG2Q5FVE4 666 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 GPAT2Q6NUI2 795 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 APBB1IPQ7Z5R6 666 aaPredicted RBP20.01■□□□□ 0.79
RTN4-201ENST00000317610 PDIK1LQ8N165 341 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 CYTH2Q99418 400 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 KLF6Q99612 283 aaPredicted RBP20.01■□□□□ 0.79
RTN4-201ENST00000317610 TARS2Q9BW92 718 aaKnown RBP20.01■□□□□ 0.79
RTN4-201ENST00000317610 YIPF3Q9GZM5 350 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 CNTN3Q9P232 1028 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 POLIQ9UNA4 740 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 IQANK1A0A1B0GTG1 560 aa20■□□□□ 0.79
RTN4-201ENST00000317610 K7ERI5 159 aa20■□□□□ 0.79
RTN4-201ENST00000317610 PIAS1O75925 651 aa20■□□□□ 0.79
RTN4-201ENST00000317610 SERPINB3P29508 390 aa20■□□□□ 0.79
RTN4-201ENST00000317610 TGFB2P61812 414 aa20■□□□□ 0.79
RTN4-201ENST00000317610 SMYD5Q6GMV2 418 aa20■□□□□ 0.79
RTN4-201ENST00000317610 THNSL1Q8IYQ7 743 aa20■□□□□ 0.79
RTN4-201ENST00000317610 ARFGAP1Q8N6T3 406 aa20■□□□□ 0.79
RTN4-201ENST00000317610 DEPTORQ8TB45 409 aa20■□□□□ 0.79
RTN4-201ENST00000317610 RSAD2Q8WXG1 361 aa20■□□□□ 0.79
RTN4-201ENST00000317610 TMEM143Q96AN5 459 aa20■□□□□ 0.79
RTN4-201ENST00000317610 C10orf88Q9H8K7 445 aa20■□□□□ 0.79
RTN4-201ENST00000317610 SPATS2LQ9NUQ6 558 aaKnown RBP20■□□□□ 0.79
RTN4-201ENST00000317610 EIF4E1BA6NMX2 242 aaKnown RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 GYG2O15488 501 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 FESP07332 822 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 CALRP27797 417 aaKnown RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 ARL2P36404 184 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 PEX19P40855 299 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 PSMC4P43686 418 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 DYNLT1P63172 113 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 CBLBQ13191 982 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 RCN1Q15293 331 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 BBS9Q3SYG4 887 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 FNIP1Q8TF40 1166 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 SLC44A1Q8WWI5 657 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 SYT15Q9BQS2 421 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 RNF146Q9NTX7 359 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 FBXO40Q9UH90 709 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 XPO7Q9UIA9 1087 aaKnown RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 LRCH1Q9Y2L9 728 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 KLF11O14901 512 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 LRCH4O75427 683 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 CST3P01034 146 aaPredicted RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 EDN1P05305 212 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 PDHA1P08559 390 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 KDELR1P24390 212 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 PSMA2P25787 234 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 IL1R2P27930 398 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 TUBP50607 506 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 GRM1Q13255 1194 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 KPNB1Q14974 876 aaKnown RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 SNX30Q5VWJ9 437 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 RINLQ6ZS11 566 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 BRSK2Q8IWQ3 736 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 UNC45BQ8IWX7 931 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 NRG4Q8WWG1 115 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 PRR11Q96HE9 360 aaPredicted RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 SERAC1Q96JX3 654 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 DHX33Q9H6R0 707 aaKnown RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 SYNCQ9H7C4 482 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 FBXO6Q9NRD1 293 aaPredicted RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 TAS2R1Q9NYW7 299 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 STRIP2Q9ULQ0 834 aa19.99■□□□□ 0.79
RTN4-201ENST00000317610 CTDP1Q9Y5B0 961 aaPredicted RBP19.99■□□□□ 0.79
RTN4-201ENST00000317610 RAD17O75943 681 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 FAM155BO75949 473 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 PSMG1O95456 288 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 SUPT20HL2P0C7V6 817 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 SLC34A1Q06495 639 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 PTK7Q13308 1070 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 CCDC6Q16204 474 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 CYP4A22Q5TCH4 519 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 WDR49Q8IV35 697 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 CDHR1Q96JP9 859 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 NIF3L1Q9GZT8 377 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 TMEM134Q9H6X4 195 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 ALG13Q9NP73 1137 aaKnown RBP19.98■□□□□ 0.79
RTN4-201ENST00000317610 CISHQ9NSE2 258 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 GINM1Q9NU53 330 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 RIPK3Q9Y572 518 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 VWA5AO00534 786 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 AHCYL1O43865 530 aa19.98■□□□□ 0.79
RTN4-201ENST00000317610 KRT36O76013 467 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms