RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MMP13P45452 471 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 YWHAEP62258 255 aaKnown RBP14.95□□□□□ -0.02
VRK3-201ENST00000316763 TRPC3Q13507 836 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 SLC27A1Q6PCB7 646 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 CEP128Q6ZU80 1094 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 ZNF365Q70YC5 407 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 APBB1IPQ7Z5R6 666 aaPredicted RBP14.95□□□□□ -0.02
VRK3-201ENST00000316763 RCOR2Q8IZ40 523 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 UBR7Q8N806 425 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 ATG4AQ8WYN0 398 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
VRK3-201ENST00000316763 ZNF518BQ9C0D4 1074 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 LRRC4CQ9HCJ2 640 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 USTQ9Y2C2 406 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 CCDC85CA6NKD9 419 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CFHP08603 1231 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 MMP8P22894 467 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 GRM5P41594 1212 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 TAP1Q03518 808 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 KLF1Q13351 362 aaPredicted RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 SLC10A6Q3KNW5 377 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 C1orf53Q5VUE5 145 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 MFSD5Q6N075 450 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 RHBDF2Q6PJF5 856 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CPLX4Q7Z7G2 160 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 FAM126BQ8IXS8 530 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CCDC89Q8N998 374 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 TMEM35BQ8NCS4 154 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 UHMK1Q8TAS1 419 aaKnown RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 FAM212AQ96EL1 285 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 RBM41Q96IZ5 413 aaKnown RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 HEMGNQ9BXL5 484 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 NIF3L1Q9GZT8 377 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 ASB7Q9H672 318 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 NOD1Q9Y239 953 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 TRPV2Q9Y5S1 764 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CDY2AQ9Y6F7 541 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 C5orf60A6NFR6 353 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 LACTBL1A8MY62 500 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 M0QZ92 97 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 PQBP1O60828 265 aaKnown RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 CD4P01730 458 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CHRNA1P02708 482 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 LIG3P49916 1009 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 ITGA8P53708 1063 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 TAS2R40P59535 323 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 MGAT3Q09327 533 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 LRRC26Q2I0M4 334 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 EPS8L3Q8TE67 593 aaKnown RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 CHMP6Q96FZ7 201 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 SERPINB12Q96P63 405 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 MTMR12Q9C0I1 747 aa14.94□□□□□ -0.02
VRK3-201ENST00000316763 CDC42EP4Q9H3Q1 356 aaKnown RBP14.94□□□□□ -0.02
VRK3-201ENST00000316763 NPTXRO95502 500 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 CST3P01034 146 aaPredicted RBP14.93□□□□□ -0.02
VRK3-201ENST00000316763 TNNC2P02585 160 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 CHN1P15882 459 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 IVDP26440 423 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
VRK3-201ENST00000316763 GJC1P36383 396 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 TLE2Q04725 743 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 PTK7Q13308 1070 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 ZFYVE27Q5T4F4 411 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 GKAP1Q5VSY0 366 aaPredicted RBP14.93□□□□□ -0.02
VRK3-201ENST00000316763 DNAJC24Q6P3W2 148 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 ANKRD33Q7Z3H0 272 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 FAM228AQ86W67 206 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 CACNA2D3Q8IZS8 1091 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 MDM1Q8TC05 714 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 CCHCR1Q8TD31 782 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 ACAP3Q96P50 834 aa14.93□□□□□ -0.02
VRK3-201ENST00000316763 EIF2AQ9BY44 585 aaKnown RBP14.93□□□□□ -0.02
VRK3-201ENST00000316763 R3HDM2Q9Y2K5 976 aaKnown RBP14.93□□□□□ -0.02
VRK3-201ENST00000316763 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 TMEM191BP0C7N4 346 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 MYL6P60660 151 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 COPS2P61201 443 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 IFI35P80217 286 aaPredicted RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 TFAMQ00059 246 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 NFX1Q12986 1120 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 IFT88Q13099 833 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 AUHQ13825 339 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 TRIP13Q15645 432 aaPredicted RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 TRIM71Q2Q1W2 868 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 LRRC38Q5VT99 294 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 DCUN1D2Q6PH85 259 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 CCDC121Q6ZUS5 278 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 ANKRD36BP1Q96IX9 119 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 SEC16BQ96JE7 1060 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 CABS1Q96KC9 395 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 HERPUD2Q9BSE4 406 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 FOXP3Q9BZS1 431 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 PLEKHA5Q9HAU0 1116 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms