RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TMBIM4Q9HC24 238 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 C3orf70A6NLC5 250 aaPredicted RBP19.32■□□□□ 0.68
CCDC43-201ENST00000315286 SEPT4O43236 478 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 XPOTO43592 962 aaKnown RBP19.32■□□□□ 0.68
CCDC43-201ENST00000315286 PDGFRBP09619 1106 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 FGFR1P11362 822 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 PTPN7P35236 360 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 HADHQ16836 314 aaKnown RBP19.32■□□□□ 0.68
CCDC43-201ENST00000315286 FAM47CQ5HY64 1035 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 ZNF618Q5T7W0 954 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 TSPAN18Q96SJ8 248 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 TRPV2Q9Y5S1 764 aa19.32■□□□□ 0.68
CCDC43-201ENST00000315286 M0QZ92 97 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 KRT7P08729 469 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 RARBP10826 455 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 CAPN2P17655 700 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 LMO2P25791 158 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 CACNB2Q08289 660 aaPredicted RBP19.31■□□□□ 0.68
CCDC43-201ENST00000315286 TRNP1Q6NT89 227 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 SLC35F5Q8WV83 523 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ATP6V1G3Q96LB4 118 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 PABPC3Q9H361 631 aaKnown RBP19.31■□□□□ 0.68
CCDC43-201ENST00000315286 GDAP2Q9NXN4 497 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 PCSK1NQ9UHG2 260 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 DNPEPQ9ULA0 475 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ST3GAL5Q9UNP4 418 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ERICH4A6NGS2 130 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 LIASO43766 372 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 CHRNA1P02708 482 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 CTSHP09668 335 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 MYZAPP0CAP1 466 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ITIH2P19823 946 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 MIPP30301 263 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 GNL1P36915 607 aaPredicted RBP19.31■□□□□ 0.68
CCDC43-201ENST00000315286 PNPLA4P41247 253 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 TAF6P49848 677 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ZNF143P52747 638 aaPredicted RBP19.31■□□□□ 0.68
CCDC43-201ENST00000315286 DNAJC21Q5F1R6 531 aaKnown RBP19.31■□□□□ 0.68
CCDC43-201ENST00000315286 SNF8Q96H20 258 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ZFP42Q96MM3 310 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 ZNF560Q96MR9 790 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 FAM129AQ9BZQ8 928 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 MIS12Q9H081 205 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 SEMA4AQ9H3S1 761 aa19.31■□□□□ 0.68
CCDC43-201ENST00000315286 GOLGA6L10A6NI86 522 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 C2CD4BA6NLJ0 364 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 MEIS3P2A8K0S8 358 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 PTGESO14684 152 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 ADAMTS4O75173 837 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 RPS6KA5O75582 802 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 GRAP2O75791 330 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 RNF8O76064 485 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 ADCY8P40145 1251 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 VPS41P49754 854 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 ACAP1Q15027 740 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 SH3PXD2AQ5TCZ1 1133 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 PRUNE1Q86TP1 453 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 RXFP2Q8WXD0 754 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 SLC4A5Q9BY07 1137 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 CENPHQ9H3R5 247 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 LRRC4CQ9HCJ2 640 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 HESX1Q9UBX0 185 aa19.3■□□□□ 0.68
CCDC43-201ENST00000315286 GABBR2O75899 941 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ATF2P15336 505 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 GPD1P21695 349 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 KDELR1P24390 212 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 NKX3-2P78367 333 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 PDE4CQ08493 712 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 BYSLQ13895 437 aaKnown RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 TAF5Q15542 800 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 UBAP2Q5T6F2 1119 aaKnown RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ARHGAP17Q68EM7 881 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 RHBDF2Q6PJF5 856 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 TMEM110Q86TL2 294 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 RSPH3Q86UC2 560 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SERINC5Q86VE9 423 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 CRYBG2Q8N1P7 616 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 HAUS1Q96CS2 278 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 HHIPL1Q96JK4 782 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ASNSD1Q9NWL6 643 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 TRUB2O95900 331 aaKnown RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ALDH1A1P00352 501 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 CD48P09326 243 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SETSIPP0DME0 302 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 CCDC130P13994 396 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 PDGFRAP16234 1089 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 ITGA8P53708 1063 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 LILRA4P59901 499 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SV2CQ496J9 727 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 RAB6CQ53S08 254 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 DRICH1Q6PGQ1 229 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-201ENST00000315286 GSTA5Q7RTV2 222 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 LIMS2Q7Z4I7 341 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 SCUBE3Q8IX30 993 aa19.29■□□□□ 0.68
CCDC43-201ENST00000315286 APPL2Q8NEU8 664 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms