RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 CLASP2O75122 1294 aaKnown RBP23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 ABLIM3O94929 683 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 SEC24AO95486 1093 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 ADH1AP07327 375 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 DUSP4Q13115 394 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 NFE2Q16621 373 aaPredicted RBP23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 PDE12Q6L8Q7 609 aaKnown RBP23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 C4orf50Q6ZRC1 276 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 ZNF461Q8TAF7 563 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 PDCL3Q9H2J4 239 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 TMEM265A0A087WTH1 108 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 TULP2O00295 520 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 AP1G2O75843 785 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 GPR15P49685 360 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 ZNF697Q5TEC3 545 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 SMYD5Q6GMV2 418 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 DNAAF5Q86Y56 855 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 KCNK16Q96T55 309 aa23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 AFF4Q9UHB7 1163 aaKnown RBP23.74■■□□□ 1.39
CCDC85B-201ENST00000312579 PLXNA3P51805 1871 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 DDX3XO00571 662 aaKnown RBP eCLIP23.73■■□□□ 1.393e-7■■■■■ 76.1
CCDC85B-201ENST00000312579 TNFAIP3P21580 790 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 GTF2F1P35269 517 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 MAP3K7CLP57077 242 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 RBM10P98175 930 aaKnown RBP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 ADGRE1Q14246 886 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 PTPROQ16827 1216 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 PKDCCQ504Y2 493 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 SDHAF4Q5VUM1 108 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 RAD9BQ6WBX8 426 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 WDTC1Q8N5D0 677 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 ANKRD52Q8NB46 1076 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 STKLD1Q8NE28 680 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 SECISBP2LQ93073 1101 aaKnown RBP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 SEPT5Q99719 369 aaPredicted RBP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 SMOQ99835 787 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 NHEJ1Q9H9Q4 299 aaPredicted RBP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 HESX1Q9UBX0 185 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 PCDHGC3Q9UN70 934 aa23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 BZW2Q9Y6E2 419 aaKnown RBP23.73■■□□□ 1.39
CCDC85B-201ENST00000312579 CCP110O43303 1012 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 FAM200BP0CF97 657 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 ATF2P15336 505 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 NRIP1P48552 1158 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 CLCN4P51793 760 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 PDE4CQ08493 712 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 MTF1Q14872 753 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 MGAT5BQ3V5L5 792 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 HABP4Q5JVS0 413 aaKnown RBP23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 TPGS2Q68CL5 300 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 LILRA6Q6PI73 481 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 Q7L0L9 218 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 ZNF677Q86XU0 584 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 SCN4BQ8IWT1 228 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 CCAR2Q8N163 923 aaKnown RBP23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 C1orf131Q8NDD1 294 aaKnown RBP23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 ZMIZ2Q8NF64 920 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 SMARCD1Q96GM5 515 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 DUSP16Q9BY84 665 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 TLE6Q9H808 572 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 CYP4F11Q9HBI6 524 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 SPTLC3Q9NUV7 552 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 ADAMTS1Q9UHI8 967 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 CYTH4Q9UIA0 394 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 PTPRDP23468 1912 aa23.72■■□□□ 1.39
CCDC85B-201ENST00000312579 CDK17Q00537 523 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 STILQ15468 1287 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 DDR2Q16832 855 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 CFAP221Q4G0U5 840 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 NAA35Q5VZE5 725 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 LLGL2Q6P1M3 1020 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 CLEC20AQ6ZU45 233 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 GPR152Q8TDT2 470 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 KCND1Q9NSA2 647 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 TAS2R14Q9NYV8 317 aa23.71■■□□□ 1.39
CCDC85B-201ENST00000312579 A0A087X0T9 212 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 TMCO5BA8MYB1 307 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 F8VP50 259 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 GLUD1P00367 558 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 FAM228BP0C875 321 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 HAPLN1P10915 354 aaPredicted RBP23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 EPCAMP16422 314 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 NPR3P17342 541 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 GRIK1P39086 918 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 GPD2P43304 727 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 RGS7P49802 495 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 MAPK8IP2Q13387 824 aaPredicted RBP23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 ASTE1Q2TB18 679 aaPredicted RBP23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 TOGARAM2Q6ZUX3 1019 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 SLC30A5Q8TAD4 765 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 SPPL2BQ8TCT7 592 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 SLC22A17Q8WUG5 538 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 CPA5Q8WXQ8 436 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 FUBP3Q96I24 572 aaKnown RBP eCLIP23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 IGFLR1Q9H665 355 aa23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 TRMT1Q9NXH9 659 aaKnown RBP23.7■■□□□ 1.38
CCDC85B-201ENST00000312579 MYH10P35580 1976 aa23.69■■□□□ 1.38
CCDC85B-201ENST00000312579 PIK3R2O00459 728 aa23.69■■□□□ 1.38
CCDC85B-201ENST00000312579 BCAT1P54687 386 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms