RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 FAM83CQ9BQN1 747 aa17.81■□□□□ 0.44
TRAPPC1-201ENST00000303731 SERTAD1Q9UHV2 236 aa17.81■□□□□ 0.44
TRAPPC1-201ENST00000303731 TRAV19A0A0A6YYK7 116 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 KIF20AO95235 890 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 CST3P01034 146 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 TDGF1P13385 188 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 LMO2P25791 158 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 SOX9P48436 509 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 PPP3CCP48454 512 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 RUNX3Q13761 415 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 PDGFRLQ15198 375 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 SDHAF4Q5VUM1 108 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 DENND5BQ6ZUT9 1274 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 CCDC47Q96A33 483 aaKnown RBP17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 SPATA32Q96LK8 384 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 SMG9Q9H0W8 520 aaKnown RBP17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 VRTNQ9H8Y1 702 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 CRTAC1Q9NQ79 661 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 GKN1Q9NS71 199 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 NCDNQ9UBB6 729 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 ANAPC1Q9H1A4 1944 aa17.8■□□□□ 0.44
TRAPPC1-201ENST00000303731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PDXKO00764 312 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 KLRC4O43908 158 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PHACTR2O75167 634 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 TADA3O75528 432 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 CKMP06732 381 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PFKFB1P16118 471 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 GRIK1P39086 918 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 ID4P47928 161 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PSMC1P62191 440 aaKnown RBP17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 CLDN10P78369 228 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 CYP27A1Q02318 531 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 TNK2Q07912 1038 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 CCINQ13939 588 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PON2Q15165 354 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 TXNDC11Q6PKC3 985 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 OR6B3Q8NGW1 331 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 PCED1BQ96HM7 432 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 ELOVL4Q9GZR5 314 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 RAB23Q9ULC3 237 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 HPSEQ9Y251 543 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 CCL26Q9Y258 94 aa17.79■□□□□ 0.44
TRAPPC1-201ENST00000303731 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 HCRTO43612 131 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 ATP2C2O75185 946 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 PDGFRBP09619 1106 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 TCF3P15923 654 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 BDNFP23560 247 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 CNR2P34972 360 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 NOP14P78316 857 aaKnown RBP17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 STK4Q13043 487 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 KCNB1Q14721 858 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 KMT5BQ4FZB7 885 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 ERMP1Q7Z2K6 904 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 CPA6Q8N4T0 437 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 KIAA1958Q8N8K9 716 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 TTC8Q8TAM2 541 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 PARD3BQ8TEW8 1205 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 C8orf48Q96LL4 319 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 SCAND2PQ9GZW5 306 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 XYLT2Q9H1B5 865 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 TRPC7Q9HCX4 862 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 DMAC2Q9NW81 257 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 TRPM5Q9NZQ8 1165 aa17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 HELZP42694 1942 aaKnown RBP17.78■□□□□ 0.44
TRAPPC1-201ENST00000303731 CEP250Q9BV73 2442 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 ATG13O75143 517 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 P4HA1P13674 534 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 PTPN1P18031 435 aaKnown RBP17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 HOXA6P31267 233 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 SYKP43405 635 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 SATB1Q01826 763 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 BIRC3Q13489 604 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 MTF1Q14872 753 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 ZNF77Q15935 545 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 CCDC142Q17RM4 750 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 KIAA0895Q8NCT3 520 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 STKLD1Q8NE28 680 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 OSCP1Q8WVF1 389 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 ZNF516Q92618 1163 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 ATP2A3Q93084 1043 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 TTLL2Q9BWV7 592 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 GZF1Q9H116 711 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 EBF3Q9H4W6 596 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 HPS4Q9NQG7 708 aa17.77■□□□□ 0.44
TRAPPC1-201ENST00000303731 CACNA1AO00555 2505 aa17.76■□□□□ 0.43
TRAPPC1-201ENST00000303731 ATP8B3O60423 1300 aa17.76■□□□□ 0.43
TRAPPC1-201ENST00000303731 DCHS1Q96JQ0 3298 aa17.76■□□□□ 0.43
TRAPPC1-201ENST00000303731 A8MXQ7 604 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms