RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 DUSP4Q13115 394 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 TPGS2Q68CL5 300 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
RFX3-201ENST00000302303 RAD9BQ6WBX8 426 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 CLEC20AQ6ZU45 233 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 DCP1BQ8IZD4 617 aaKnown RBP10.06□□□□□ -0.8
RFX3-201ENST00000302303 DUSP16Q9BY84 665 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
RFX3-201ENST00000302303 ENTPD7Q9NQZ7 604 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 TJP2Q9UDY2 1190 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 AFF4Q9UHB7 1163 aaKnown RBP10.06□□□□□ -0.8
RFX3-201ENST00000302303 ADAMTS1Q9UHI8 967 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 SLC27A5Q9Y2P5 690 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 PLXNA3P51805 1871 aa10.06□□□□□ -0.8
RFX3-201ENST00000302303 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 TNFRSF10BO14763 440 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 PAPLNO95428 1278 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 SPATA31D3P0C874 917 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 CPB1P15086 417 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 ATF6P18850 670 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 ADORA2BP29275 332 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 MAGEA11P43364 429 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 PDE6CP51160 858 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 GSDMDP57764 484 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 NOMO3P69849 1222 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 CYP27A1Q02318 531 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 DUSP6Q16828 381 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 GOLGA7BQ2TAP0 167 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 HABP4Q5JVS0 413 aaKnown RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 PMF1Q6P1K2 205 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 GPRIN1Q7Z2K8 1008 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 PASD1Q8IV76 773 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 TCEAL8Q8IYN2 117 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 FUBP3Q96I24 572 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFX3-201ENST00000302303 ZNF830Q96NB3 372 aaPredicted RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 REXO2Q9Y3B8 237 aaKnown RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 MTCH2Q9Y6C9 303 aa10.05□□□□□ -0.8
RFX3-201ENST00000302303 BZW2Q9Y6E2 419 aaKnown RBP10.05□□□□□ -0.8
RFX3-201ENST00000302303 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 FAM170AA1A519 330 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 LCA5LO95447 670 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 GLP2RO95838 553 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 C1RP00736 705 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 TPM1P09493 284 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 EPCAMP16422 314 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 KLRC2P26717 231 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 MAP3K7CLP57077 242 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 HYAL1Q12794 435 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 STILQ15468 1287 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 MAPRE1Q15691 268 aaKnown RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 DDR2Q16832 855 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 CLEC16AQ2KHT3 1053 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 RAB41Q5JT25 222 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 SDHAF4Q5VUM1 108 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 BHLHA9Q7RTU4 235 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 RBM23Q86U06 439 aaKnown RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 STKLD1Q8NE28 680 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 SPPL2BQ8TCT7 592 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 C2orf15Q8WU43 125 aaKnown RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 SECISBP2LQ93073 1101 aaKnown RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 BAG1Q99933 345 aaPredicted RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 KRT82Q9NSB4 513 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
RFX3-201ENST00000302303 IL37Q9NZH6 218 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 LMCD1Q9NZU5 365 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 NAGPAQ9UK23 515 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
RFX3-201ENST00000302303 TCRBV5S1A1TA0A578 114 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 F8VP50 259 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 M0QYV0 167 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 MED7O43513 233 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 AP1G2O75843 785 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 ADH1AP07327 375 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 NPR3P17342 541 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 PGFP49763 221 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 CREMQ03060 361 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 CENPCQ03188 943 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 COL19A1Q14993 1142 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 SLC18A3Q16572 532 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms