RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SPEM1Q8N4L4 309 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 ZNF830Q96NB3 372 aaPredicted RBP22.5■■□□□ 1.19
SMCO4-201ENST00000298966 USP20Q9Y2K6 914 aa22.5■■□□□ 1.19
SMCO4-201ENST00000298966 AKR1B15C9JRZ8 316 aaPredicted RBP22.49■■□□□ 1.19
SMCO4-201ENST00000298966 OGTO15294 1046 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 HRO43593 1189 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 GDF9O60383 454 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 TRIM21P19474 475 aaKnown RBP22.49■■□□□ 1.19
SMCO4-201ENST00000298966 LRRC32Q14392 662 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 ARID5BQ14865 1188 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 NOLC1Q14978 699 aaKnown RBP eCLIP22.49■■□□□ 1.19
SMCO4-201ENST00000298966 IL31Q6EBC2 164 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 IQCEQ6IPM2 695 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 GBP6Q6ZN66 633 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 PCMTD1Q96MG8 357 aaPredicted RBP22.49■■□□□ 1.19
SMCO4-201ENST00000298966 TCHPQ9BT92 498 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 GOLGA2P5Q9HBQ8 144 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 PTPRHQ9HD43 1115 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 ANGPTL2Q9UKU9 493 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 SIK3Q9Y2K2 1263 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 INSL5Q9Y5Q6 135 aa22.49■■□□□ 1.19
SMCO4-201ENST00000298966 PDCD11Q14690 1871 aaKnown RBP22.49■■□□□ 1.19
SMCO4-201ENST00000298966 CFAP47Q6ZTR5 3102 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 H7C4K7 107 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 MCF2P10911 925 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 CCR2P41597 374 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 FMO5P49326 533 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 AP3M2P53677 418 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 CYP24A1Q07973 514 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 LRMPQ12912 555 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 C1orf228Q6PIY5 440 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 LONP2Q86WA8 852 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 C3orf58Q8NDZ4 430 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 ZNF397Q8NF99 534 aaPredicted RBP22.48■■□□□ 1.19
SMCO4-201ENST00000298966 CSGALNACT1Q8TDX6 532 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 MSANTD3Q96H12 275 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 ZNF512Q96ME7 567 aaPredicted RBP22.48■■□□□ 1.19
SMCO4-201ENST00000298966 PANX2Q96RD6 677 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 NUCKS1Q9H1E3 243 aaKnown RBP22.48■■□□□ 1.19
SMCO4-201ENST00000298966 PLCB1Q9NQ66 1216 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 ANKFY1Q9P2R3 1169 aa22.48■■□□□ 1.19
SMCO4-201ENST00000298966 SEC24AO95486 1093 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 VIPR2P41587 438 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 CCZ1BP86790 482 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 CCZ1P86791 482 aaPredicted RBP22.47■■□□□ 1.19
SMCO4-201ENST00000298966 DMWDQ09019 674 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 SRSF5Q13243 272 aaKnown RBP22.47■■□□□ 1.19
SMCO4-201ENST00000298966 GAS6Q14393 721 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 PSMD6Q15008 389 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 EXOC3L4Q17RC7 722 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 ZNF568Q3ZCX4 644 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 TPGS2Q68CL5 300 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 CEP68Q76N32 757 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 CBWD2Q8IUF1 395 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 TC2NQ8N9U0 490 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 NEK11Q8NG66 645 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 PARD3BQ8TEW8 1205 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 SAAL1Q96ER3 474 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 ZSWIM3Q96MP5 696 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 FAM213AQ9BRX8 229 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 NAA15Q9BXJ9 866 aaKnown RBP22.47■■□□□ 1.19
SMCO4-201ENST00000298966 FBXL5Q9UKA1 691 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 CAPN11Q9UMQ6 739 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 LUC7L2Q9Y383 392 aaKnown RBP22.47■■□□□ 1.19
SMCO4-201ENST00000298966 SDK1Q7Z5N4 2213 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 FAM208BQ5VWN6 2430 aa22.47■■□□□ 1.19
SMCO4-201ENST00000298966 NRG2O14511 850 aaPredicted RBP22.46■■□□□ 1.19
SMCO4-201ENST00000298966 ABLIM1O14639 778 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 SYN3O14994 580 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 MFAP3LO75121 409 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 PAPSS2O95340 614 aaPredicted RBP22.46■■□□□ 1.19
SMCO4-201ENST00000298966 GYPCP04921 128 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 EDN1P05305 212 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 ADRB2P07550 413 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 MYL4P12829 197 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 MLLT6P55198 1093 aaPredicted RBP22.46■■□□□ 1.19
SMCO4-201ENST00000298966 CLDN10P78369 228 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 HEATR6Q6AI08 1181 aaKnown RBP22.46■■□□□ 1.19
SMCO4-201ENST00000298966 MFSD6LQ8IWD5 586 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 YAF2Q8IY57 180 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 HS6ST3Q8IZP7 471 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 RDH13Q8NBN7 331 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 LEMD2Q8NC56 503 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 ZSCAN18Q8TBC5 510 aaPredicted RBP22.46■■□□□ 1.19
SMCO4-201ENST00000298966 E2F7Q96AV8 911 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 TRPV4Q9HBA0 871 aa22.46■■□□□ 1.19
SMCO4-201ENST00000298966 CEP295Q9C0D2 2601 aa22.45■■□□□ 1.19
SMCO4-201ENST00000298966 GREB1Q4ZG55 1949 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 SMIM28A0A1B0GU29 152 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 GOLGA8IPA6NC78 632 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 GOLGA8JA6NMD2 632 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 ZNF500O60304 480 aaPredicted RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 YARSP54577 528 aaKnown RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 MYL7Q01449 175 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 TSR1Q2NL82 804 aaKnown RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 AASDHQ4L235 1098 aaPredicted RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 FMNL3Q8IVF7 1028 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 BRSK2Q8IWQ3 736 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 KIAA1524Q8TCG1 905 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 FNBP1Q96RU3 617 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms