RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MTDHQ86UE4 582 aaKnown RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 MCPH1Q8NEM0 835 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 SLCO2A1Q92959 643 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 TRAIPQ9BWF2 469 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 C10orf88Q9H8K7 445 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PHF24Q9UPV7 400 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PSMG1O95456 288 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 AP1B1Q10567 949 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 FASTKD3Q14CZ7 662 aaKnown RBP16.34■□□□□ 0.21
UBAP1-201ENST00000297661 NLRP9Q7RTR0 991 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 ZNF668Q96K58 619 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-201ENST00000297661 MSTO1Q9BUK6 570 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 AVENQ9NQS1 362 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-201ENST00000297661 MAP3K7O43318 606 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 IMPDH2P12268 514 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 SCNN1BP51168 640 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 HUNKP57058 714 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 VGLL4Q14135 290 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 SPARCL1Q14515 664 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 PSMD6Q15008 389 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 SLC45A4Q5BKX6 768 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 ZBTB33Q86T24 672 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 KBTBD2Q8IY47 623 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 TMEM130Q8N3G9 435 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
UBAP1-201ENST00000297661 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 KLRG1Q96E93 195 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 ZNF184Q99676 751 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-201ENST00000297661 SAR1AQ9NR31 198 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 ATXN10Q9UBB4 475 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 DNPEPQ9ULA0 475 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 GRID1Q9ULK0 1009 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 NUMBLQ9Y6R0 609 aa16.34■□□□□ 0.21
UBAP1-201ENST00000297661 BANF1O75531 89 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 GLRA2P23416 452 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.21
UBAP1-201ENST00000297661 CTC1Q2NKJ3 1217 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 SPDYAQ5MJ70 313 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 ENOSF1Q7L5Y1 443 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 CLNKQ7Z7G1 428 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 RHOT1Q8IXI2 618 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 ABRAQ8N0Z2 381 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 ARHGAP18Q8N392 663 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 SPATA16Q9BXB7 569 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 UBN1Q9NPG3 1134 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 NEU2Q9Y3R4 380 aa16.33■□□□□ 0.21
UBAP1-201ENST00000297661 F8VP50 259 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 K7ERI5 159 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 CST3P01034 146 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-201ENST00000297661 LYNP07948 512 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 TNFSF9P41273 254 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 SLC1A1P43005 524 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 LIN9Q5TKA1 542 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 RGS9BPQ6ZS82 235 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 NCAPG2Q86XI2 1143 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 DEPTORQ8TB45 409 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 DENND1AQ8TEH3 1009 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 GRK7Q8WTQ7 553 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 MAML1Q92585 1016 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBAP1-201ENST00000297661 CCDC77Q9BR77 488 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 EURLQ9NYK6 297 aa16.33■□□□□ 0.2
UBAP1-201ENST00000297661 SAE1Q9UBE0 346 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-201ENST00000297661 GOLGA8SH3BPF8 625 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 CCDC22O60826 627 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 PDK4Q16654 411 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 MFSD7Q6UXD7 560 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 NCSTNQ92542 709 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 BTBD10Q9BSF8 475 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 C17orf75Q9HAS0 396 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 SAYSD1Q9NPB0 183 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 STX18Q9P2W9 335 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF148Q9UQR1 794 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 WDR81Q562E7 1941 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 POC1B-GALNT4F8VUJ3 575 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 C2CD2LO14523 706 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 GSC2O15499 205 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 ZSCAN9O15535 394 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 HNRNPCL1O60812 293 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 COQ9O75208 318 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 NEK3P51956 506 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 BACE1P56817 501 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 CNTN2Q02246 1040 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 STAT4Q14765 748 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 GSTA3Q16772 222 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 C2orf69Q8N8R5 385 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 STMN2Q93045 179 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 MCEEQ96PE7 176 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 SYNCQ9H7C4 482 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms